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taxprofiler/modules/nf-core
Sofia Stamouli 35b296e5fd
Merge pull request #202 from nf-core/nf-core-template-merge-2.7.2
Important! Template update for nf-core/tools v2.7.2
2022-12-21 09:18:40 +01:00
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adapterremoval Fix adapterremoval adapter conflict and add optional adapter list file 2022-10-27 12:17:19 +00:00
bbmap/bbduk Merge branch 'devel' into nf-core-template-merge-2.6 2022-10-05 12:21:54 +02:00
bowtie2 Merge branch 'devel' into nf-core-template-merge-2.6 2022-10-05 12:21:54 +02:00
bracken Update combine bracken outputs to include meta for publishing purposes 2022-12-12 10:10:24 +01:00
cat/fastq chore: force update all modules 2022-10-05 12:24:18 +02:00
centrifuge chore: force update all modules 2022-10-05 12:24:18 +02:00
custom/dumpsoftwareversions Template update for nf-core/tools version 2.7.2 2022-12-19 12:10:58 +00:00
diamond/blastx Merge branch 'devel' into nf-core-template-merge-2.6 2022-10-05 12:21:54 +02:00
falco Include falco patch 2022-12-15 13:27:41 +01:00
fastp Addd FASTP adadapter list 2022-11-02 12:39:34 +01:00
fastqc Template update for nf-core/tools version 2.7.2 2022-12-19 12:10:58 +00:00
filtlong Merge branch 'devel' into nf-core-template-merge-2.6 2022-10-05 12:21:54 +02:00
gunzip chore: force update all modules 2022-10-05 12:24:18 +02:00
kaiju chore: force update all modules 2022-10-05 12:24:18 +02:00
kraken2/kraken2 Merge branch 'devel' into nf-core-template-merge-2.6 2022-10-05 12:21:54 +02:00
krakentools chore: force update all modules 2022-10-05 12:24:18 +02:00
krakenuniq/preloadedkrakenuniq Bump KrakenUniq version 2022-12-20 20:08:12 +01:00
krona chore: force update all modules 2022-10-05 12:24:18 +02:00
malt/run Fix linting 2022-11-24 15:49:06 +01:00
megan/rma2info chore: force update all modules 2022-10-05 12:24:18 +02:00
metaphlan3 Merge branch 'devel' into nf-core-template-merge-2.6 2022-10-05 12:21:54 +02:00
minimap2 Remove necessity of patch 2022-10-11 12:38:18 +02:00
motus Update mOTUs to 3.0.3 2022-12-12 15:42:01 +01:00
multiqc Template update for nf-core/tools version 2.7.2 2022-12-19 12:10:58 +00:00
porechop/porechop Fix porechop conflict 2022-11-01 17:34:37 +01:00
prinseqplusplus Merge branch 'devel' into nf-core-template-merge-2.6 2022-10-05 12:21:54 +02:00
samtools Add samtools stats for long-reads 2022-10-28 11:40:50 +02:00
untar chore: force update all modules 2022-10-05 12:24:18 +02:00