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39 lines
1.4 KiB
Markdown
39 lines
1.4 KiB
Markdown
# nf-core/taxprofiler: Changelog
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The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/)
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and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
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## dev
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### `Added`
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### `Fixed`
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- [#271](https://github.com/nf-core/taxprofiler/pull/271/files) Improved standardised table generation documentation nd mOTUs manual database download tutorial (♥ to @prototaxites for reporting, fix by @jfy133)
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- [#269](https://github.com/nf-core/taxprofiler/pull/269/files) Reduced output files in AWS full test output due to very large files
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- [#270](https://github.com/nf-core/taxprofiler/pull/270/files) Fixed warning for host removal index parameter, and improved index checks (♥ to @prototaxites for reporting, fix by @jfy133)
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- [#274](https://github.com/nf-core/taxprofiler/pull/274/files) Substituted the samtools/bam2fq module with samtools/fastq module (fix by @sofstam)
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### `Dependencies`
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### `Deprecated`
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## v1.0.0 - Dodgy Dachshund [2023-03-13]
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Initial release of nf-core/taxprofiler, created with the [nf-core](https://nf-co.re/) template.
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- Add read quality control (sequencing QC, adapter removal and merging)
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- Add read complexity filtering
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- Add host-reads removal step
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- Add run merging
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- Add taxonomic classification
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- Add taxon table standardisation
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- Add post-classification visualisation
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### `Added`
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### `Fixed`
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### `Dependencies`
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### `Deprecated`
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