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feature/niave-abstract-types

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• fb5b7dfacf Remove commented-out code Thomas A. Christensen II 2022-12-30 14:07:27 -0600
• 73d2781ee9 Update CHANGELOG Thomas A. Christensen II 2022-12-17 16:49:01 -0600
• 6ba583de4f Bump version number in Project.toml Thomas A. Christensen II 2022-12-17 16:42:31 -0600
• 17f4cd6f39 Update CHANGELOG Thomas A. Christensen II 2022-12-06 11:26:44 -0600
• 128a5445ad Switch alignment validation to after edit construction Thomas A. Christensen II 2022-12-17 15:00:40 -0600
• f9058c5cb3 Update ranges to allow end position insertions Thomas A. Christensen II 2022-12-17 14:59:59 -0600
• 5be4dce200 Add check for soft clips when construction Variants from alignment Thomas A. Christensen II 2022-12-06 11:05:18 -0600
• d8435be115 Add Variation-level validation for Variants Thomas A. Christensen II 2022-12-06 11:04:23 -0600
• 91c3acc85e Add equality function for Variant Thomas A. Christensen II 2022-12-06 10:59:31 -0600
• f9e76d60d6 Add test for ending substitutions being invalid Thomas A. Christensen II 2022-12-06 10:02:39 -0600
• 3b61ccefb5 Add test for ending insertion Thomas A. Christensen II 2022-12-06 10:02:17 -0600
• abff6692d4 Add test for combined clips Thomas A. Christensen II 2022-12-06 10:01:46 -0600
• dd00231840 Add test for soft clips Thomas A. Christensen II 2022-12-05 15:34:39 -0600
• b45081a56e Update CHANGELOG for v0.1.3 Thomas A. Christensen II 2022-11-22 11:58:16 -0600
• 00495d4e14 Bump version number in Project.toml Thomas A. Christensen II 2022-11-22 11:57:56 -0600
• 3ed27f0c4e Update CHANGELOG Thomas A. Christensen II 2022-11-22 10:28:01 -0600
• 3b33c85d00 Add type parameterization to variations getter Thomas A. Christensen II 2022-11-22 10:23:34 -0600
• 752b482a0b Update CHANGELOG for v0.1.2 Thomas A. Christensen II 2022-10-04 11:48:33 -0500
• 4de936cc83 Update project version number to v0.1.2 Thomas A. Christensen II 2022-10-04 11:46:58 -0500
• 780a5add8a Update CHANGELOG Thomas A. Christensen II 2022-10-04 11:32:11 -0500
• b20d603f95 Add ranged dependency compats Thomas A. Christensen II 2022-10-04 11:25:07 -0500
• f7278bd7d7 Remove unused AminoAcidSeq reference Thomas A. Christensen II 2022-10-04 11:21:48 -0500
• c945dc63dd
  Release v0.1.1 (#19) Thomas A. Christensen II 2022-07-21 12:59:47 +0000
• 1bbb85153c Add constructor for Variant based on Variations Thomas A. Christensen II 2022-07-20 17:13:06 -0500
• 6a77d6d589
  Merge pull request #16 from MillironX/feature/getbases Thomas A. Christensen II 2022-07-14 15:00:10 +0000
• 1cfe128070
  
  Update CHANGELOG Thomas A. Christensen II 2022-07-13 16:52:11 -0500
• 97e1d193a6
  
  Add VCF spec tests for reference and alternate bases Thomas A. Christensen II 2022-07-07 10:38:15 -0500
• b8e44c7b81
  
  Add public alternate base getter for Variation Thomas A. Christensen II 2022-07-11 12:56:33 -0500
• cab314ec0b
  
  Add public reference base getter for Variation Thomas A. Christensen II 2022-07-11 12:54:51 -0500
• ccbe6eed62
  
  Add private alternate base getter for Insertion Thomas A. Christensen II 2022-07-11 12:52:16 -0500
• 1b7c7f86d7
  
  Add private reference base getter for Insertion Thomas A. Christensen II 2022-07-11 12:51:58 -0500
• 145e9e5f88
  
  Add private alternate base getter for Deletion Thomas A. Christensen II 2022-07-11 12:51:35 -0500
• bc073eaf20
  
  Add private reference base getter for Deletion Thomas A. Christensen II 2022-07-11 12:51:13 -0500
• c1f47c7b22
  
  Add private alternate base getter for Substitution Thomas A. Christensen II 2022-07-11 12:50:40 -0500
• 73c2c2764f
  
  Add private reference base getter for Substitution Thomas A. Christensen II 2022-07-11 12:50:20 -0500
• a80ff869ce
  
  Fix reference(::Variation) Thomas A. Christensen II 2022-07-11 12:53:35 -0500
• ece50c1ee9
  Remove 32-bit arches from unit testing CI workflow Thomas A. Christensen II 2022-07-11 19:07:07 +0000
• 467fa4d261
  Fix iterator error in API auto-documentation Thomas A. Christensen II 2022-07-11 19:04:20 +0000
• 1c9511310f
  Update Documentation CI workflow to use julia-actions workflows Thomas A. Christensen II 2022-07-11 18:57:48 +0000
• 9920ad2517
  Update CI Unit Tests job name to match parameters matrix Thomas A. Christensen II 2022-07-11 18:47:40 +0000
• 03a4eb392d
  Update CI Unit Tests job name to match parameters matrix Thomas A. Christensen II 2022-07-11 18:39:55 +0000
• 976d5b3a3d
  Merge pull request #12 from MillironX/registration-prep Thomas A. Christensen II 2022-07-11 18:29:34 +0000
• 2ccc2551f5
  
  Add README Thomas A. Christensen II 2022-07-05 10:59:27 -0500
• 60cf5c1b0a
  
  Add a changelog Thomas A. Christensen II 2022-07-05 10:53:34 -0500
• e8bb2f6f8e
  
  Add license Thomas A. Christensen II 2022-07-05 10:45:51 -0500
• f7f9e3190c
  
  Add compat section for all dependencies to Project.toml Thomas A. Christensen II 2022-07-11 13:25:22 -0500
• a461152e55
  
  Add Thomas Christensen as author in Project.toml Thomas A. Christensen II 2022-07-11 13:24:38 -0500
• 3d03740741
  
  Update documentation Thomas A. Christensen II 2022-07-05 10:34:21 -0500
• 4ef7ba4450
  
  Run DocumenterTools.generate() Thomas A. Christensen II 2022-07-05 10:09:40 -0500
• 39f3de83ad
  
  Add pull request template Thomas A. Christensen II 2022-07-05 10:07:49 -0500
• 15420d4f52
  
  Add feature request template Thomas A. Christensen II 2022-07-05 10:05:00 -0500
• e4300d020a
  
  Add bug report template Thomas A. Christensen II 2022-07-05 10:04:52 -0500
• 72611659f1
  
  Install JuliaRegistrator Thomas A. Christensen II 2022-07-05 09:43:35 -0500
• 23f75aad22
  
  Add CompatHelper workflow Thomas A. Christensen II 2022-07-05 09:42:35 -0500
• 6e2eab42c7
  
  Add unit testing workflow Thomas A. Christensen II 2022-07-05 09:42:26 -0500
• c5b28e282f
  
  Add TagBot workflow Thomas A. Christensen II 2022-07-05 09:31:34 -0500
• 48470028ca
  
  Add documentation workflow Thomas A. Christensen II 2022-07-05 09:29:51 -0500
• a1f55d1c70
  
  Add Julia gitignore Thomas A. Christensen II 2022-07-05 09:19:06 -0500
• d9cd1fb33f
  
  Remove Manifest.toml Thomas A. Christensen II 2022-07-05 09:17:50 -0500
• e79968c4ec
  Merge pull request #11 from MillironX/feature/variations-from-variant Thomas A. Christensen II 2022-07-05 09:16:03 -0500
• 36cbd5abb9
  
  Add tests for variations function Thomas A. Christensen II 2022-06-15 13:44:27 -0500
• 6d7a93604a
  
  Add function to get variations from variant Thomas A. Christensen II 2022-06-15 13:06:20 -0500
• dbdc575d75
  
  Add accessor functions for Variant Thomas A. Christensen II 2022-06-15 13:45:02 -0500
• 89cad0120f
  
  Add rightposition functions Thomas A. Christensen II 2022-06-22 12:06:27 -0500
• 538b612faf
  Merge pull request #10 from MillironX/feature/variation-equality Thomas A. Christensen II 2022-06-30 17:04:01 -0500
• fe1bbcc0f3
  
  Add hash function for Variation Thomas A. Christensen II 2022-06-14 16:34:50 -0500
• 70965732cf
  
  Add equality function for Variation Thomas A. Christensen II 2022-06-14 16:34:36 -0500
• 5f7d5e59a1
  Merge pull request #9 from MillironX/feature/variations-parse Thomas A. Christensen II 2022-06-30 16:22:20 -0500
• 6bc1528d18
  
  Add tests for Variation parsing Thomas A. Christensen II 2022-06-14 16:24:55 -0500
• 2d05b233a9
  
  Add accessor functions for Variation properties Thomas A. Christensen II 2022-06-14 16:20:39 -0500
• 1e6f6ea075
  
  Add accessor functions for Edit properties Thomas A. Christensen II 2022-06-14 16:17:16 -0500
• 101f401635
  
  Add BioGenerics dependency Thomas A. Christensen II 2022-06-14 16:15:04 -0500
• 9967ff4df2
  
  Add test dependencies to project file Thomas A. Christensen II 2022-06-14 15:36:58 -0500
• 76d5b6059e
  
  Add Variation constructor based on edit parsing Thomas A. Christensen II 2022-06-14 14:48:39 -0500
• ade9b7e41d
  Fix inconsistent Variation positions (#4) Thomas A. Christensen II 2022-05-06 05:26:49 -0500
• d0f0f65d7f
  Fix show function for Variations with Insertion edits (#3) Thomas A. Christensen II 2022-05-06 05:25:07 -0500
• 92a2d40553 Implement translate Jakob Nybo Nissen 2022-01-26 14:59:19 +0100
• 8024d50889 More stuff Jakob Nybo Nissen 2021-09-15 13:33:37 +0200
• 87277268f6 Full rewrite Jakob Nybo Nissen 2021-08-24 16:30:11 +0200
• 642658f592 Add parsing Jakob Nybo Nissen 2021-03-02 17:55:17 +0100
• 354f18e0e4 Switch to SumTypes Jakob Nybo Nissen 2021-03-02 15:50:37 +0100
• 40749eb6f5 Start fixing Jakob Nybo Nissen 2021-03-02 13:20:25 +0100
• 64ae3bc862 Rewrite Jakob Nybo Nissen 2020-10-20 15:26:27 +0200
• ad3fe4303f Initial commit Jakob Nybo Nissen 2020-10-01 17:03:01 +0200