[⚡ AUTOMATED]: Pkg upgrade for 2024-12-02

Files changed:\nM	Manifest.toml

Manifest.toml

@@ -259,9 +259,9 @@ version = "0.2.2"
 
 [[ChainRules]]
 deps = ["Adapt", "ChainRulesCore", "Compat", "Distributed", "GPUArraysCore", "IrrationalConstants", "LinearAlgebra", "Random", "RealDot", "SparseArrays", "SparseInverseSubset", "Statistics", "StructArrays", "SuiteSparse"]
-git-tree-sha1 = "9e2503a7ac8df599cbf422af95729b2d263220f6"
+git-tree-sha1 = "bcffdcaed50d3453673b852f3522404a94b50fad"
 uuid = "082447d4-558c-5d27-93f4-14fc19e9eca2"
-version = "1.72.0"
+version = "1.72.1"
 
 [[ChainRulesCore]]
 deps = ["Compat", "LinearAlgebra", "SparseArrays"]
@@ -543,9 +543,9 @@ version = "7.10.0"
 
 [[Discretizers]]
 deps = ["DataStructures", "SpecialFunctions", "Statistics", "StatsBase"]
-git-tree-sha1 = "88fd187ed6a84a6f1892ab883484f8ec765108ec"
+git-tree-sha1 = "3ac8e0ed0f999053c897bc5d2adf1c01d16afc00"
 uuid = "6e83dbb3-75ca-525b-8ae2-3751f0dd50b4"
-version = "3.2.3"
+version = "3.2.4"
 
 [[Distances]]
 deps = ["LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI"]
@@ -668,9 +668,9 @@ version = "2.0.4"
 
 [[FileIO]]
 deps = ["Pkg", "Requires", "UUIDs"]
-git-tree-sha1 = "91e0e5c68d02bcdaae76d3c8ceb4361e8f28d2e9"
+git-tree-sha1 = "2dd20384bf8c6d411b5c7370865b1e9b26cb2ea3"
 uuid = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549"
-version = "1.16.5"
+version = "1.16.6"
 
 [[FilePathsBase]]
 deps = ["Compat", "Dates", "Mmap", "Test"]
@@ -719,9 +719,9 @@ version = "0.10.38"
 
 [[FreeType2_jll]]
 deps = ["Artifacts", "Bzip2_jll", "JLLWrappers", "Libdl", "Zlib_jll"]
-git-tree-sha1 = "5c1d8ae0efc6c2e7b1fc502cbe25def8f661b7bc"
+git-tree-sha1 = "786e968a8d2fb167f2e4880baba62e0e26bd8e4e"
 uuid = "d7e528f0-a631-5988-bf34-fe36492bcfd7"
-version = "2.13.2+0"
+version = "2.13.3+1"
 
 [[FriBidi_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl"]
@@ -804,9 +804,9 @@ version = "0.5.4"
 
 [[GenomicAnnotations]]
 deps = ["BioGenerics", "BioSequences", "CodecZlib", "DataFrames", "TranscodingStreams"]
-git-tree-sha1 = "459c597419c90f8b004aef505e1358721f672658"
+git-tree-sha1 = "96b870db2c0e6d5a9257eb1370e3d17477040124"
 uuid = "4f8a0a0a-376d-5ac0-ab14-e88793df67f0"
-version = "0.4.2"
+version = "0.4.4"
 
 [[GenomicFeatures]]
 deps = ["BioGenerics", "DataStructures", "IntervalTrees"]
@@ -828,9 +828,9 @@ version = "9.55.0+4"
 
 [[Glib_jll]]
 deps = ["Artifacts", "Gettext_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Libiconv_jll", "Libmount_jll", "PCRE2_jll", "Zlib_jll"]
-git-tree-sha1 = "674ff0db93fffcd11a3573986e550d66cd4fd71f"
+git-tree-sha1 = "b36c7e110080ae48fdef61b0c31e6b17ada23b33"
 uuid = "7746bdde-850d-59dc-9ae8-88ece973131d"
-version = "2.80.5+0"
+version = "2.82.2+0"
 
 [[Graphics]]
 deps = ["Colors", "LinearAlgebra", "NaNMath"]
@@ -840,9 +840,9 @@ version = "1.1.3"
 
 [[Graphite2_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
-git-tree-sha1 = "344bf40dcab1073aca04aa0df4fb092f920e4011"
+git-tree-sha1 = "01979f9b37367603e2848ea225918a3b3861b606"
 uuid = "3b182d85-2403-5c21-9c21-1e1f0cc25472"
-version = "1.3.14+0"
+version = "1.3.14+1"
 
 [[Graphs]]
 deps = ["ArnoldiMethod", "Compat", "DataStructures", "Distributed", "Inflate", "LinearAlgebra", "Random", "SharedArrays", "SimpleTraits", "SparseArrays", "Statistics"]
@@ -1157,9 +1157,9 @@ version = "0.4.53"
 
 [[JLFzf]]
 deps = ["Pipe", "REPL", "Random", "fzf_jll"]
-git-tree-sha1 = "39d64b09147620f5ffbf6b2d3255be3c901bec63"
+git-tree-sha1 = "71b48d857e86bf7a1838c4736545699974ce79a2"
 uuid = "1019f520-868f-41f5-a6de-eb00f4b6a39c"
-version = "0.1.8"
+version = "0.1.9"
 
 [[JLLWrappers]]
 deps = ["Artifacts", "Preferences"]
@@ -1357,10 +1357,10 @@ uuid = "d4300ac3-e22c-5743-9152-c294e39db1e4"
 version = "1.11.0+0"
 
 [[Libglvnd_jll]]
-deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libX11_jll", "Xorg_libXext_jll"]
-git-tree-sha1 = "6f73d1dd803986947b2c750138528a999a6c7733"
+deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_libX11_jll", "Xorg_libXext_jll"]
+git-tree-sha1 = "ff3b4b9d35de638936a525ecd36e86a8bb919d11"
 uuid = "7e76a0d4-f3c7-5321-8279-8d96eeed0f29"
-version = "1.6.0+0"
+version = "1.7.0+0"
 
 [[Libgpg_error_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl"]
@@ -1376,9 +1376,9 @@ version = "1.17.0+1"
 
 [[Libmount_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl"]
-git-tree-sha1 = "0c4f9c4f1a50d8f35048fa0532dabbadf702f81e"
+git-tree-sha1 = "84eef7acd508ee5b3e956a2ae51b05024181dee0"
 uuid = "4b2f31a3-9ecc-558c-b454-b3730dcb73e9"
-version = "2.40.1+0"
+version = "2.40.2+0"
 
 [[Libtiff_jll]]
 deps = ["Artifacts", "JLLWrappers", "JpegTurbo_jll", "LERC_jll", "Libdl", "Pkg", "Zlib_jll", "Zstd_jll"]
@@ -1388,9 +1388,9 @@ version = "4.4.0+0"
 
 [[Libuuid_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl"]
-git-tree-sha1 = "5ee6203157c120d79034c748a2acba45b82b8807"
+git-tree-sha1 = "edbf5309f9ddf1cab25afc344b1e8150b7c832f9"
 uuid = "38a345b3-de98-5d2b-a5d3-14cd9215e700"
-version = "2.40.1+0"
+version = "2.40.2+0"
 
 [[Libz]]
 deps = ["BufferedStreams", "Random", "Test"]
@@ -1573,9 +1573,9 @@ version = "1.0.20"
 
 [[MutableArithmetics]]
 deps = ["LinearAlgebra", "SparseArrays", "Test"]
-git-tree-sha1 = "90077f1e79de8c9c7c8a90644494411111f4e07b"
+git-tree-sha1 = "a2710df6b0931f987530f59427441b21245d8f5e"
 uuid = "d8a4904e-b15c-11e9-3269-09a3773c0cb0"
-version = "1.5.2"
+version = "1.6.0"
 
 [[MyterialColors]]
 git-tree-sha1 = "01d8466fb449436348999d7c6ad740f8f853a579"
@@ -1731,9 +1731,9 @@ uuid = "91d4177d-7536-5919-b921-800302f37372"
 version = "1.3.3+0"
 
 [[OrderedCollections]]
-git-tree-sha1 = "dfdf5519f235516220579f949664f1bf44e741c5"
+git-tree-sha1 = "12f1439c4f986bb868acda6ea33ebc78e19b95ad"
 uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d"
-version = "1.6.3"
+version = "1.7.0"
 
 [[OrdinaryDiffEq]]
 deps = ["ADTypes", "Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastBroadcast", "FastClosures", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "IfElse", "InteractiveUtils", "LineSearches", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "NonlinearSolve", "Polyester", "PreallocationTools", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLNLSolve", "SciMLOperators", "SimpleNonlinearSolve", "SimpleUnPack", "SparseArrays", "SparseDiffTools", "StaticArrayInterface", "StaticArrays", "TruncatedStacktraces"]
@@ -1863,10 +1863,10 @@ uuid = "1d0040c9-8b98-4ee7-8388-3f51789ca0ad"
 version = "0.2.2"
 
 [[Polynomials]]
-deps = ["LinearAlgebra", "RecipesBase", "Requires", "Setfield", "SparseArrays"]
-git-tree-sha1 = "1a9cfb2dc2c2f1bd63f1906d72af39a79b49b736"
+deps = ["LinearAlgebra", "OrderedCollections", "RecipesBase", "Requires", "Setfield", "SparseArrays"]
+git-tree-sha1 = "adc25dbd4d13f148f3256b6d4743fe7e63a71c4a"
 uuid = "f27b6e38-b328-58d1-80ce-0feddd5e7a45"
-version = "4.0.11"
+version = "4.0.12"
 
 [[PooledArrays]]
 deps = ["DataAPI", "Future"]
@@ -2093,9 +2093,9 @@ version = "0.5.1+0"
 
 [[Roots]]
 deps = ["Accessors", "ChainRulesCore", "CommonSolve", "Printf"]
-git-tree-sha1 = "3a7c7e5c3f015415637f5debdf8a674aa2c979c4"
+git-tree-sha1 = "8e3694d669323cdfb560e344dc872b984de23b71"
 uuid = "f2b01f46-fcfa-551c-844a-d8ac1e96c665"
-version = "2.2.1"
+version = "2.2.2"
 
 [[Rotations]]
 deps = ["LinearAlgebra", "Quaternions", "Random", "RecipesBase", "StaticArrays"]
@@ -2563,9 +2563,9 @@ version = "3.6.5"
 
 [[Unitful]]
 deps = ["ConstructionBase", "Dates", "InverseFunctions", "LinearAlgebra", "Random"]
-git-tree-sha1 = "d95fe458f26209c66a187b1114df96fd70839efd"
+git-tree-sha1 = "01915bfcd62be15329c9a07235447a89d588327c"
 uuid = "1986cc42-f94f-5a68-af5c-568840ba703d"
-version = "1.21.0"
+version = "1.21.1"
 
 [[UnitfulLatexify]]
 deps = ["LaTeXStrings", "Latexify", "Unitful"]
@@ -2675,9 +2675,9 @@ version = "0.4.1"
 
 [[XSLT_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl", "Libgcrypt_jll", "Libgpg_error_jll", "Libiconv_jll", "XML2_jll", "Zlib_jll"]
-git-tree-sha1 = "a54ee957f4c86b526460a720dbc882fa5edcbefc"
+git-tree-sha1 = "7d1671acbe47ac88e981868a078bd6b4e27c5191"
 uuid = "aed1982a-8fda-507f-9586-7b0439959a61"
-version = "1.1.41+0"
+version = "1.1.42+0"
 
 [[XZ_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl"]
@@ -2687,15 +2687,15 @@ version = "5.6.3+0"
 
 [[Xorg_libX11_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_libxcb_jll", "Xorg_xtrans_jll"]
-git-tree-sha1 = "afead5aba5aa507ad5a3bf01f58f82c8d1403495"
+git-tree-sha1 = "9dafcee1d24c4f024e7edc92603cedba72118283"
 uuid = "4f6342f7-b3d2-589e-9d20-edeb45f2b2bc"
-version = "1.8.6+0"
+version = "1.8.6+1"
 
 [[Xorg_libXau_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl"]
-git-tree-sha1 = "6035850dcc70518ca32f012e46015b9beeda49d8"
+git-tree-sha1 = "2b0e27d52ec9d8d483e2ca0b72b3cb1a8df5c27a"
 uuid = "0c0b7dd1-d40b-584c-a123-a41640f87eec"
-version = "1.0.11+0"
+version = "1.0.11+1"
 
 [[Xorg_libXcursor_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libXfixes_jll", "Xorg_libXrender_jll"]
@@ -2705,15 +2705,15 @@ version = "1.2.0+4"
 
 [[Xorg_libXdmcp_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl"]
-git-tree-sha1 = "34d526d318358a859d7de23da945578e8e8727b7"
+git-tree-sha1 = "02054ee01980c90297412e4c809c8694d7323af3"
 uuid = "a3789734-cfe1-5b06-b2d0-1dd0d9d62d05"
-version = "1.1.4+0"
+version = "1.1.4+1"
 
 [[Xorg_libXext_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_libX11_jll"]
-git-tree-sha1 = "d2d1a5c49fae4ba39983f63de6afcbea47194e85"
+git-tree-sha1 = "d7155fea91a4123ef59f42c4afb5ab3b4ca95058"
 uuid = "1082639a-0dae-5f34-9b06-72781eeb8cb3"
-version = "1.3.6+0"
+version = "1.3.6+1"
 
 [[Xorg_libXfixes_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libX11_jll"]
@@ -2747,15 +2747,15 @@ version = "0.9.11+0"
 
 [[Xorg_libpthread_stubs_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl"]
-git-tree-sha1 = "8fdda4c692503d44d04a0603d9ac0982054635f9"
+git-tree-sha1 = "fee57a273563e273f0f53275101cd41a8153517a"
 uuid = "14d82f49-176c-5ed1-bb49-ad3f5cbd8c74"
-version = "0.1.1+0"
+version = "0.1.1+1"
 
 [[Xorg_libxcb_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl", "XSLT_jll", "Xorg_libXau_jll", "Xorg_libXdmcp_jll", "Xorg_libpthread_stubs_jll"]
-git-tree-sha1 = "bcd466676fef0878338c61e655629fa7bbc69d8e"
+git-tree-sha1 = "1a74296303b6524a0472a8cb12d3d87a78eb3612"
 uuid = "c7cfdc94-dc32-55de-ac96-5a1b8d977c5b"
-version = "1.17.0+0"
+version = "1.17.0+1"
 
 [[Xorg_libxkbfile_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl", "Xorg_libX11_jll"]
@@ -2807,9 +2807,9 @@ version = "2.39.0+0"
 
 [[Xorg_xtrans_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl"]
-git-tree-sha1 = "e92a1a012a10506618f10b7047e478403a046c77"
+git-tree-sha1 = "b9ead2d2bdb27330545eb14234a2e300da61232e"
 uuid = "c5fb5394-a638-5e4d-96e5-b29de1b5cf10"
-version = "1.5.0+0"
+version = "1.5.0+1"
 
 [[YAML]]
 deps = ["Base64", "Dates", "Printf", "StringEncodings"]
@@ -2819,9 +2819,9 @@ version = "0.4.12"
 
 [[ZMQ]]
 deps = ["FileWatching", "PrecompileTools", "Sockets", "ZeroMQ_jll"]
-git-tree-sha1 = "18cfd00df3cbbebf8ea4ec7ea6bbceb3af716bd0"
+git-tree-sha1 = "33333bdded3835f81b9b6353da9243dc4ec62e0f"
 uuid = "c2297ded-f4af-51ae-bb23-16f91089e4e1"
-version = "1.3.0"
+version = "1.4.0"
 
 [[ZeroMQ_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl", "libsodium_jll"]
@@ -2853,9 +2853,9 @@ version = "0.2.5"
 
 [[fzf_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl"]
-git-tree-sha1 = "936081b536ae4aa65415d869287d43ef3cb576b2"
+git-tree-sha1 = "6e50f145003024df4f5cb96c7fce79466741d601"
 uuid = "214eeab7-80f7-51ab-84ad-2988db7cef09"
-version = "0.53.0+0"
+version = "0.56.3+0"
 
 [[libaom_jll]]
 deps = ["Artifacts", "JLLWrappers", "Libdl"]