feat: Add parameter validation
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main.nf
4
main.nf
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@ -1,5 +1,7 @@
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#!/usr/bin/env nextflow
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include { validateParameters } from 'plugin/nf-validation'
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include { CLIQUESNV } from './modules/cliquesnv'
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include { EFETCH } from './modules/efetch'
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include { HAPLINK_HAPLOTYPES as HAPLINK_ML_HAPLOTYPES } from './modules/haplink/haplotypes'
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@ -15,6 +17,8 @@ include { VIQUAS } from './modules/viquas'
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workflow {
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validateParameters()
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Channel
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.fromPath("*.fastq.gz")
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.map { file -> tuple(file.simpleName, file) }
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