feat: Add CliqueSNV to pipeline
This commit is contained in:
parent
96471746b9
commit
d8fee48c28
1 changed files with 5 additions and 5 deletions
10
main.nf
10
main.nf
|
@ -34,6 +34,11 @@ workflow {
|
||||||
.out
|
.out
|
||||||
.set { ch_alignments }
|
.set { ch_alignments }
|
||||||
|
|
||||||
|
CLIQUESNV(
|
||||||
|
ch_alignments,
|
||||||
|
'snv-pacbio'
|
||||||
|
)
|
||||||
|
|
||||||
HAPLINK_VARIANTS( ch_alignments, ch_reference )
|
HAPLINK_VARIANTS( ch_alignments, ch_reference )
|
||||||
HAPLINK_VARIANTS
|
HAPLINK_VARIANTS
|
||||||
.out
|
.out
|
||||||
|
@ -75,9 +80,4 @@ workflow {
|
||||||
ch_alignments,
|
ch_alignments,
|
||||||
ch_reference
|
ch_reference
|
||||||
)
|
)
|
||||||
|
|
||||||
CLIQUESNV(
|
|
||||||
ch_alignments,
|
|
||||||
'snv-pacbio'
|
|
||||||
)
|
|
||||||
}
|
}
|
||||||
|
|
Loading…
Reference in a new issue