Commit graph

14 commits

Author SHA1 Message Date
38d779b1dc
fix: Use GitHub containers registry for HapLink modules
There are still issues with using the Biocontainers build of HapLink within
certain container platforms (cough, Singularity). Use the more exotic, but
more stable, one directly from the lab.
2023-09-30 16:19:28 -05:00
b98a797701
feat: Add control flow for choosing haplotypers 2023-09-26 08:49:57 -05:00
9364225e74
fix: Change input cardinality on haplotyping modules 2023-09-26 08:49:56 -05:00
5c4d02263b
refactor: Replace custom publish dirs with reference to task.process 2023-09-26 08:49:11 -05:00
002bd44975
refactor: Change output directory to match haplotypes 2023-09-26 08:49:10 -05:00
4751203579
feat: Add container directive to HAPLINK_SEQUENCES 2023-09-26 08:49:09 -05:00
095aff629d
refactor: Replace performance directives with process label 2023-09-26 08:49:09 -05:00
517b8eb66b
feat: Add method/prefix tag to HAPLINK_SEQUENCES 2023-09-26 08:49:08 -05:00
5162f649d8
refactor: Move HAPLINK_SEQUENCES module to its own file 2023-09-26 08:49:07 -05:00
47500bc986
feat: Add new HAPLINK_HAPLOTYPES module 2023-09-26 08:49:05 -05:00
2c755dcd4f
refactor: Replace hard-coded performance directives with process label 2023-09-23 15:27:05 -05:00
cc433aaffe
feat: Add container directive to HAPLINK_VARIANTS 2023-09-23 15:23:45 -05:00
a223b87464
feat: Add tag directive to HAPLINK_VARIANTS module 2023-09-23 15:22:13 -05:00
2829d51533
refactor: Move HAPLINK_VARIANTS module to its own folder 2023-09-23 15:21:26 -05:00