93bd5cedec
chore: Replace results dir with parameterized outdir
2023-10-18 21:40:08 -05:00
38d779b1dc
fix: Use GitHub containers registry for HapLink modules
...
There are still issues with using the Biocontainers build of HapLink within
certain container platforms (cough, Singularity). Use the more exotic, but
more stable, one directly from the lab.
2023-09-30 16:19:28 -05:00
b98a797701
feat: Add control flow for choosing haplotypers
2023-09-26 08:49:57 -05:00
9364225e74
fix: Change input cardinality on haplotyping modules
2023-09-26 08:49:56 -05:00
5c4d02263b
refactor: Replace custom publish dirs with reference to task.process
2023-09-26 08:49:11 -05:00
002bd44975
refactor: Change output directory to match haplotypes
2023-09-26 08:49:10 -05:00
4751203579
feat: Add container directive to HAPLINK_SEQUENCES
2023-09-26 08:49:09 -05:00
095aff629d
refactor: Replace performance directives with process label
2023-09-26 08:49:09 -05:00
517b8eb66b
feat: Add method/prefix tag to HAPLINK_SEQUENCES
2023-09-26 08:49:08 -05:00
5162f649d8
refactor: Move HAPLINK_SEQUENCES module to its own file
2023-09-26 08:49:07 -05:00
47500bc986
feat: Add new HAPLINK_HAPLOTYPES module
2023-09-26 08:49:05 -05:00
2c755dcd4f
refactor: Replace hard-coded performance directives with process label
2023-09-23 15:27:05 -05:00
cc433aaffe
feat: Add container directive to HAPLINK_VARIANTS
2023-09-23 15:23:45 -05:00
a223b87464
feat: Add tag directive to HAPLINK_VARIANTS module
2023-09-23 15:22:13 -05:00
2829d51533
refactor: Move HAPLINK_VARIANTS module to its own folder
2023-09-23 15:21:26 -05:00
