Commit graph

15 commits

Author SHA1 Message Date
eb7cd4e382
fix: Remove undefined POSIX behavior 2023-08-09 23:39:02 -05:00
054c1853f5
fix: Change permissions on ViQuaS install 2023-08-09 23:36:24 -05:00
a4478cdf7f
fix: Add ps to final container 2023-08-09 23:25:43 -05:00
ebcbb53cb1
refactor: Switch to multi-stage build 2023-08-09 23:21:33 -05:00
58759e3314
fix: Add user permissions to ViQuas folder 2023-08-09 18:17:45 -05:00
0997616190
refactor: Add container declaration to ViQuas module 2023-08-09 18:09:31 -05:00
d0b25c41b9
fix: Add BAM index to ViQuas input 2023-08-09 17:53:07 -05:00
9198d1186c
feat: Add ViQuas to main pipeline 2023-08-09 16:09:55 -05:00
1e20488409
feat: Add ViQuas module 2023-08-09 16:07:54 -05:00
108fb0dc5b
refactor: Minimize Dockerfile layers 2023-08-09 16:02:46 -05:00
a1d0348697
feat: Create working Dockerfile for ViQuas 2023-08-09 15:28:35 -05:00
ad10d46c87
feat: Add SHORAH_SHOTGUN process 2023-06-08 18:12:23 -05:00
feb051fc07
feat: Add SHORAH_AMPLICON process 2023-06-08 18:11:33 -05:00
58b18cc2c9
chore: Add gitignore 2023-06-08 17:56:39 -05:00
7743bf31c6
feat: Import HapLink validation script 2023-06-08 17:55:57 -05:00