nf-configs/conf/pipeline/eager/shh.config

// Profile config names for nf-core/configs

params {
  // Specific nf-core/configs params
  config_profile_contact = 'James Fellows Yates (@jfy133)'
  config_profile_description = 'JFY nf-core/eager SHH profile provided by nf-core/configs'
  igenomes_base = "/projects1/public_data/igenomes/"
}

// Specific nf-core/eager process configuration
process {
  withName: malt {
    maxRetries = 1
    memory = {  task.attempt > 1 ? 1900.GB : 725.GB }
    cpus = { task.attempt > 1 ? 112 : 64 }
    time = 1440.h
    queue = { task.memory > 756.GB ? 'supercruncher' : 'long' }
  }
}

params {
    bwaalnn = 0.01
    bwaalnl = 32
}