2019-01-04 08:55:22 -05:00
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//Profile config names for nf-core/configs
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params {
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2019-01-07 08:25:06 -05:00
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config_profile_description = 'BINAC cluster profile provided by nf-core/configs.'
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2019-01-04 08:55:22 -05:00
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config_profile_contact = 'Alexander Peltzer (@apeltzer)'
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config_profile_url = 'https://www.bwhpc-c5.de/wiki/index.php/Category:BwForCluster_BinAC'
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}
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2019-03-12 13:48:29 -04:00
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2018-11-23 10:56:34 -05:00
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singularity {
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2018-11-26 17:47:36 -05:00
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enabled = true
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2019-12-11 08:26:57 -05:00
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envWhitelist = 'TZ'
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2018-11-23 10:56:34 -05:00
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}
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process {
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2019-11-11 07:56:17 -05:00
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beforeScript = 'module load devel/singularity/3.4.2'
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2018-11-26 17:47:36 -05:00
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executor = 'pbs'
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2020-02-19 05:27:02 -05:00
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queue = { task.memory >= 128.GB ? 'smp': task.time <= 20.m ? 'tiny' : task.time > 48.h ? 'long' : 'short'}
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2018-11-23 10:56:34 -05:00
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}
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params {
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2019-03-12 09:58:41 -04:00
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igenomes_base = '/nfsmounts/igenomes'
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2019-10-28 08:21:41 -04:00
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max_memory = 1000.GB
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2018-11-23 10:56:34 -05:00
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max_cpus = 28
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2020-02-19 05:27:02 -05:00
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max_time = 168.h
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2018-11-23 10:56:34 -05:00
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}
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2019-10-08 08:19:42 -04:00
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weblog{
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enabled = true
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2019-10-10 06:56:39 -04:00
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url = 'https://services.qbic.uni-tuebingen.de/flowstore/workflows'
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2019-10-08 08:19:42 -04:00
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}
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