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@ -5,11 +5,8 @@ params {
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config_profile_url = 'http://scicom.picr.man.ac.uk/projects/user-support/wiki'
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}
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env {
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SINGULARITY_CACHEDIR = '/lmod/nextflow_software'
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}
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singularity {
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cacheDir = '/lmod/nextflow_software'
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enabled = true
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autoMounts = true
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}
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@ -22,6 +19,11 @@ process {
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maxErrors = '-1'
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maxRetries = 3
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withLabel:process_single {
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cpus = { check_max( 1 * task.attempt, 'cpus' ) }
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memory = { check_max( 5.GB * task.attempt, 'memory' ) }
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}
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withLabel:process_low {
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cpus = { check_max( 1 * task.attempt, 'cpus' ) }
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memory = { check_max( 5.GB * task.attempt, 'memory' ) }
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