mirror of
https://github.com/MillironX/nf-configs.git
synced 2024-11-22 08:29:54 +00:00
Add the Pasteur profile
This commit is contained in:
parent
9106559b2f
commit
1b30c5a4d2
1 changed files with 24 additions and 0 deletions
24
conf/pasteur.config
Normal file
24
conf/pasteur.config
Normal file
|
@ -0,0 +1,24 @@
|
||||||
|
//Profile config names for nf-core/configs
|
||||||
|
params {
|
||||||
|
config_profile_description = 'The Institut Pasteur HPC cluster profile'
|
||||||
|
config_profile_contact = 'Remi Planel (@rplanel)'
|
||||||
|
config_profile_url = 'https://research.pasteur.fr/en/service/tars-cluster/'
|
||||||
|
}
|
||||||
|
|
||||||
|
singularity {
|
||||||
|
enabled = true
|
||||||
|
autoMounts = true
|
||||||
|
runOptions = '-B /local/scratch:/tmp'
|
||||||
|
}
|
||||||
|
|
||||||
|
process {
|
||||||
|
executor = 'slurm'
|
||||||
|
clusterOptions = { "-A $params.project ${params.clusterOptions ?: ''}" }
|
||||||
|
}
|
||||||
|
|
||||||
|
params {
|
||||||
|
igenomesIgnore = true
|
||||||
|
max_memory = 256.GB
|
||||||
|
max_cpus = 28
|
||||||
|
max_time = 24.h
|
||||||
|
}
|
Loading…
Reference in a new issue