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eddie.config for viralrecon pipeline
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conf/pipeline/viralrecon/eddie.config
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9
conf/pipeline/viralrecon/eddie.config
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process {
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withName : '.*PICARD.*' {
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clusterOptions = {"-l h_vmem=${(task.memory + 4.GB).bytes/task.cpus}"}
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}
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withName : '.*SNPEFF.*' {
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clusterOptions = {"-l h_vmem=${(task.memory + 4.GB).bytes/task.cpus}"}
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}
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}
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