Adrija Kalvisa
|
7959b14385
|
Merge branch 'nf-core:master' into master
|
2022-09-22 13:15:32 +02:00 |
|
Austyn Trull
|
5400df135d
|
Merge pull request #412 from nf-core/cheaha_env_variable_updates
Fix cheaha config due to use of incorrect variable
|
2022-09-21 13:38:24 -05:00 |
|
ggabernet
|
c709be3b59
|
update cfc config maintenance
|
2022-09-18 12:06:37 +02:00 |
|
James A. Fellows Yates
|
ec638e62de
|
Apply suggestions from code review
Co-authored-by: Jasmin F <73216762+jasmezz@users.noreply.github.com>
|
2022-09-15 09:10:29 +02:00 |
|
James A. Fellows Yates
|
b8751af6c6
|
Update conf/pipeline/mag/eva.config
|
2022-09-14 16:17:17 +02:00 |
|
James Fellows Yates
|
c0effc0366
|
Add HKI profile files
|
2022-09-14 15:34:27 +02:00 |
|
James A. Fellows Yates
|
8ea01e2041
|
Merge branch 'nf-core:master' into master
|
2022-09-14 15:01:34 +02:00 |
|
James A. Fellows Yates
|
3fcf708134
|
Merge pull request #414 from sheffield-bioinformatics-core/sbc_sharc
Added global institutional and pipeline configs for sbc_sharc
|
2022-09-14 11:46:41 +02:00 |
|
lquayle88
|
91bfa7341f
|
Made changes requested for PR
|
2022-09-14 08:42:40 +01:00 |
|
Bruno Grande
|
3d3ee391be
|
Limit the number of parallel transfers
|
2022-09-13 13:15:30 -07:00 |
|
lquayle88
|
9fef35d7d3
|
Updated pipeline configs for atacseq and chipseq
|
2022-09-13 17:08:56 +01:00 |
|
lquayle88
|
a9b62c53e0
|
Added global institutional and pipeline configs for sbc_sharc
|
2022-09-13 17:02:44 +01:00 |
|
Bruno Grande
|
abae5c4bd8
|
Decrease AWS Batch queue size
|
2022-09-12 11:40:43 -07:00 |
|
Bruno Grande
|
80831358f9
|
Merge branch 'master' into bgrande/sage-aws
|
2022-09-01 13:21:36 -07:00 |
|
Lara Ianov
|
8448bb9a1e
|
re-define TMPDIR
|
2022-09-01 10:12:07 -05:00 |
|
Simon Pearce
|
2c738cae33
|
Update crukmi.config
|
2022-09-01 11:24:11 +01:00 |
|
Simon Pearce
|
a8faeda141
|
Update crukmi.config
|
2022-09-01 11:23:07 +01:00 |
|
SPearce
|
800931bff2
|
Add Sarek specific config
|
2022-09-01 11:13:23 +01:00 |
|
Simon Pearce
|
ba1d3f24cc
|
Update crukmi.config
|
2022-09-01 11:07:14 +01:00 |
|
Simon Pearce
|
81768e16a9
|
Merge branch 'nf-core:master' into crukmi
|
2022-09-01 10:20:25 +01:00 |
|
Simon Pearce
|
14a97ad0e8
|
Merge branch 'master' into crukmi
|
2022-09-01 10:07:24 +01:00 |
|
James Fellows Yates
|
b22e8b79c7
|
Fix cheaha config due to use of environmental variable
|
2022-09-01 11:01:23 +02:00 |
|
Kalayanee Chairat
|
9681716205
|
Update adcra.config
Fixing typo
|
2022-09-01 15:11:18 +07:00 |
|
Kalayanee Chairat
|
700f14d828
|
Merge pull request #1 from nf-core/master
Merging from master
|
2022-09-01 15:07:43 +07:00 |
|
Simon Pearce
|
864da0b5be
|
Merge branch 'master' into crukmi
|
2022-08-31 18:19:47 +01:00 |
|
Bruno Grande
|
9a37404a04
|
Merge branch 'master' into bgrande/sage-aws
|
2022-08-31 09:22:07 -07:00 |
|
Bruno Grande
|
179b343bd2
|
Incorporate resource limits
|
2022-08-31 09:18:27 -07:00 |
|
Bruno Grande
|
c883723559
|
Simplify resource adjustments
|
2022-08-31 09:10:30 -07:00 |
|
SPearce
|
1e1ca1e96b
|
Incorporating executor options
|
2022-08-31 15:35:57 +01:00 |
|
Annick Renevey
|
51871ea6fc
|
rnafusion setup for hasta usage
|
2022-08-31 11:32:01 +02:00 |
|
Lara Ianov
|
08b62ede83
|
Merge pull request #404 from nf-core/cheaha_singularity_update
Cheaha Config Update
|
2022-08-30 14:45:50 -05:00 |
|
James A. Fellows Yates
|
c70a95f9c9
|
Merge branch 'master' into patch-2
|
2022-08-29 08:23:31 +02:00 |
|
Bruno Grande
|
9c8cb71bc7
|
Merge branch 'master' into bgrande/sage-aws
|
2022-08-25 16:29:20 -07:00 |
|
Bruno Grande
|
317e5a16cb
|
Improve AWS-related config for Sage profile
|
2022-08-25 16:24:52 -07:00 |
|
kalayaneech
|
93c4ba67a0
|
adding adcra configuration
|
2022-08-25 16:17:09 +07:00 |
|
Harshil Patel
|
8b9661825b
|
Replace NC_063383.1 fasta and gff and add Nextclade config
|
2022-08-24 15:21:44 +01:00 |
|
Harshil Patel
|
8dcfcfd856
|
Add monkeypox genome files to viralrecon genome config file
|
2022-08-24 12:13:17 +01:00 |
|
Austyn Trull
|
8d5ae4c3ab
|
Committing changes made by Brandon Wilk so that singularity containers will use scratch space
|
2022-08-23 15:30:13 -05:00 |
|
Ramprasad Neethiraj
|
9182b55acc
|
Merge branch 'master' into feat/hasta_update
|
2022-08-23 11:21:58 +02:00 |
|
Ramprasad Neethiraj
|
7ff2977a29
|
Merge branch 'master' of github.com:nf-core/configs into feat/hasta_update
|
2022-08-18 15:58:56 +02:00 |
|
Ramprasad Neethiraj
|
dd63dee7aa
|
update conf
|
2022-08-18 15:56:41 +02:00 |
|
Ramprasad Neethiraj
|
1c942759ea
|
update sentieon
|
2022-08-18 15:52:31 +02:00 |
|
Ramprasad Neethiraj
|
a6cce4ab6a
|
Merge branch 'master' into feat/hasta_java_memory_fix
|
2022-08-18 13:36:08 +02:00 |
|
SPearce
|
8ae3cba5e3
|
Reduce MPILEUP to 5GB
|
2022-08-15 11:35:59 +01:00 |
|
SPearce
|
0bfedde296
|
Initial attempt at a CRUKMI config file
|
2022-08-12 15:43:22 +01:00 |
|
Gwenna Breton
|
ffefefe0ab
|
Added contact emails
|
2022-08-08 16:11:55 +02:00 |
|
Gwenna Breton
|
6aa78833c3
|
Merge branch 'master' into medair
|
2022-08-01 16:46:55 +02:00 |
|
James A. Fellows Yates
|
0b47849532
|
Update mpcdf.config
|
2022-07-27 14:23:29 +02:00 |
|
Priyanka Surana
|
58508c4fbc
|
Sanger profile update
|
2022-07-20 13:14:42 +01:00 |
|
Nicolas Vannieuwkerke
|
f40825ac14
|
lower submission rate for vsc_ugent
|
2022-07-14 15:50:50 +02:00 |
|