Simon Pearce
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2c738cae33
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Update crukmi.config
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2022-09-01 11:24:11 +01:00 |
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Simon Pearce
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a8faeda141
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Update crukmi.config
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2022-09-01 11:23:07 +01:00 |
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SPearce
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800931bff2
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Add Sarek specific config
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2022-09-01 11:13:23 +01:00 |
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Simon Pearce
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ba1d3f24cc
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Update crukmi.config
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2022-09-01 11:07:14 +01:00 |
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Simon Pearce
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81768e16a9
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Merge branch 'nf-core:master' into crukmi
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2022-09-01 10:20:25 +01:00 |
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Simon Pearce
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14a97ad0e8
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Merge branch 'master' into crukmi
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2022-09-01 10:07:24 +01:00 |
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James Fellows Yates
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b22e8b79c7
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Fix cheaha config due to use of environmental variable
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2022-09-01 11:01:23 +02:00 |
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Kalayanee Chairat
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9681716205
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Update adcra.config
Fixing typo
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2022-09-01 15:11:18 +07:00 |
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Kalayanee Chairat
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700f14d828
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Merge pull request #1 from nf-core/master
Merging from master
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2022-09-01 15:07:43 +07:00 |
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Simon Pearce
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864da0b5be
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Merge branch 'master' into crukmi
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2022-08-31 18:19:47 +01:00 |
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SPearce
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1e1ca1e96b
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Incorporating executor options
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2022-08-31 15:35:57 +01:00 |
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Annick Renevey
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51871ea6fc
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rnafusion setup for hasta usage
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2022-08-31 11:32:01 +02:00 |
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Lara Ianov
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08b62ede83
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Merge pull request #404 from nf-core/cheaha_singularity_update
Cheaha Config Update
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2022-08-30 14:45:50 -05:00 |
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James A. Fellows Yates
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c70a95f9c9
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Merge branch 'master' into patch-2
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2022-08-29 08:23:31 +02:00 |
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kalayaneech
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93c4ba67a0
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adding adcra configuration
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2022-08-25 16:17:09 +07:00 |
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Harshil Patel
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8b9661825b
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Replace NC_063383.1 fasta and gff and add Nextclade config
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2022-08-24 15:21:44 +01:00 |
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Harshil Patel
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8dcfcfd856
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Add monkeypox genome files to viralrecon genome config file
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2022-08-24 12:13:17 +01:00 |
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Austyn Trull
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8d5ae4c3ab
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Committing changes made by Brandon Wilk so that singularity containers will use scratch space
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2022-08-23 15:30:13 -05:00 |
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Ramprasad Neethiraj
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9182b55acc
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Merge branch 'master' into feat/hasta_update
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2022-08-23 11:21:58 +02:00 |
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Ramprasad Neethiraj
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7ff2977a29
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Merge branch 'master' of github.com:nf-core/configs into feat/hasta_update
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2022-08-18 15:58:56 +02:00 |
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Ramprasad Neethiraj
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dd63dee7aa
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update conf
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2022-08-18 15:56:41 +02:00 |
|
Ramprasad Neethiraj
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1c942759ea
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update sentieon
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2022-08-18 15:52:31 +02:00 |
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Ramprasad Neethiraj
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a6cce4ab6a
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Merge branch 'master' into feat/hasta_java_memory_fix
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2022-08-18 13:36:08 +02:00 |
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SPearce
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8ae3cba5e3
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Reduce MPILEUP to 5GB
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2022-08-15 11:35:59 +01:00 |
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SPearce
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0bfedde296
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Initial attempt at a CRUKMI config file
|
2022-08-12 15:43:22 +01:00 |
|
Gwenna Breton
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ffefefe0ab
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Added contact emails
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2022-08-08 16:11:55 +02:00 |
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Gwenna Breton
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6aa78833c3
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Merge branch 'master' into medair
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2022-08-01 16:46:55 +02:00 |
|
James A. Fellows Yates
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0b47849532
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Update mpcdf.config
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2022-07-27 14:23:29 +02:00 |
|
Priyanka Surana
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58508c4fbc
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Sanger profile update
|
2022-07-20 13:14:42 +01:00 |
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Nicolas Vannieuwkerke
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f40825ac14
|
lower submission rate for vsc_ugent
|
2022-07-14 15:50:50 +02:00 |
|
Harshil Patel
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2ab126fa4d
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Update default Nextclade dataset to 2022-06-14T12:00:00Z
|
2022-07-11 18:28:41 +01:00 |
|
Gwenna Breton
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4538e8aa36
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Update medair.config
- added path to singularity image for Sentieon
- harmonized alignment
|
2022-07-07 13:41:42 +02:00 |
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Gwennid
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b6e2d03a02
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Added Singularity cache dir
|
2022-07-06 13:59:35 +02:00 |
|
James A. Fellows Yates
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a141ff626b
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Merge branch 'master' into eva-java-correction
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2022-07-04 13:35:50 +02:00 |
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Gwenna Breton
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b3a6e199ca
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Merge branch 'nf-core:master' into medair
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2022-07-01 17:02:56 +02:00 |
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Nicolas Vannieuwkerke
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8a74c517d4
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Merge branch 'vsc-ugent-fix' of github.com:nvnieuwk/configs into vsc-ugent-fix
|
2022-07-01 16:16:22 +02:00 |
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Nicolas Vannieuwkerke
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1e34595280
|
removed queue size limit
|
2022-07-01 16:16:18 +02:00 |
|
nvnieuwk
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5ff845cde7
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Merge branch 'master' into vsc-ugent-fix
|
2022-07-01 16:10:45 +02:00 |
|
Nicolas Vannieuwkerke
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fa949a069e
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added queuesize
|
2022-07-01 16:01:19 +02:00 |
|
Nicolas Vannieuwkerke
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abfa3f47f4
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lowered the job submit rate of vsc_ugent
|
2022-07-01 15:55:44 +02:00 |
|
Gwenna Breton
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bb35d8e5d1
|
Added conf file for medair
|
2022-06-30 11:42:36 +02:00 |
|
Bruno Grande
|
6f0d9e6c43
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Complete check_max() move to global config
|
2022-06-23 10:10:28 -07:00 |
|
Bruno Grande
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a19d79f6ff
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Move check_max() to global config
|
2022-06-23 09:44:16 -07:00 |
|
Bruno Grande
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1c7230cb08
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Add Sage-specific Sarek config
|
2022-06-23 09:15:42 -07:00 |
|
Bruno Grande
|
37121faf4a
|
Fix typoe with label name
|
2022-06-22 14:37:43 -07:00 |
|
Bruno Grande
|
ecd898584d
|
Handle Sarek-specific max labels
|
2022-06-22 13:54:13 -07:00 |
|
Bruno Grande
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c7093dee13
|
Reduce max_memory to fit on an instance
|
2022-06-16 12:37:32 -07:00 |
|
James Fellows Yates
|
acabcbd9e8
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Use _JAVA_OPTIONS instead
|
2022-06-15 15:27:40 +02:00 |
|
James Fellows Yates
|
76b0d1dd85
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Merge branch 'eva-java-correction' of github.com:jfy133/nf-core-configs into eva-java-correction
|
2022-06-15 15:22:25 +02:00 |
|
James Fellows Yates
|
58dd9d49c7
|
Move beforeScript exports to env scope
|
2022-06-15 15:21:20 +02:00 |
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