65 commits

Author	SHA1	Message	Date
Maxime Garcia	2144a1dc04	Apply suggestions from code review	2020-02-20 17:19:30 +01:00
Maxime Garcia	08e2804b37	Merge branch 'master' into Uppmax	2020-02-20 17:18:46 +01:00
MaxUlysse	aa905cd645	add UPPMAX specific sarek config	2020-02-20 17:14:18 +01:00
Harshil Patel	ef8534d481	Update README.md	2020-02-11 11:57:04 +00:00
marchoeppner	0830203b70	Adding new CCGA Med Cluster to profiles ... Updating README and fixing linting errors in CCGA_MED profile Fixing order in profile queue and removed leading slash from readme for ccga profile docs Fixing order in profile queue and removed leading slash from readme for ccga profile docs	2020-02-11 11:12:51 +01:00
Alexander Peltzer	ecc850fd83	Omit this in TOC	2019-12-11 16:13:15 +01:00
Alexander Peltzer	a6d08ed646	Adjust custom pipeline config for ampliseq on BINAC	2019-12-11 16:09:44 +01:00
James A. Fellows Yates	71b47e3efa	Updated README to include EAGER specific configs	2019-12-10 11:39:24 +01:00
MaxUlysse	cdbdbee0eb	replace -profile uppmax_devel by -profile uppmax,devel	2019-12-05 11:49:44 +01:00
Maxime Garcia	2669401a72	Merge branch 'master' into sarek	2019-11-27 13:27:43 +01:00
MaxUlysse	752fca0530	fix level of hostname	2019-11-27 13:25:52 +01:00
MaxUlysse	7f61d2f81b	fix TOC	2019-11-27 13:18:39 +01:00
MaxUlysse	8a73e7f2f8	better explanation	2019-11-27 13:16:08 +01:00
Alexander Peltzer	da922b8005	Fix README	2019-11-26 15:45:33 +01:00
Alexander Peltzer	5806cd14e8	Merge branch 'master' of https://github.com/nf-core/configs	2019-11-26 15:36:07 +01:00
Alexander Peltzer	9cb5137ef2	Better description	2019-11-26 15:12:42 +01:00
Alexander Peltzer	23f9fd2d73	Merge branch 'master' into master	2019-11-26 14:20:36 +01:00
Maxime Garcia	68c709432f	Apply suggestions from code review ... Co-Authored-By: Phil Ewels <phil.ewels@scilifelab.se>	2019-11-26 14:17:32 +01:00
Maxime Garcia	f4115bc1a9	Update README.md ... Co-Authored-By: Phil Ewels <phil.ewels@scilifelab.se>	2019-11-26 14:10:05 +01:00
MaxUlysse	209763620a	update README	2019-11-26 11:48:29 +01:00
Maxime Garcia	29f0442c3a	Update README.md ... Co-Authored-By: James A. Fellows Yates <jfy133@users.noreply.github.com>	2019-11-26 11:48:29 +01:00
MaxUlysse	283abcece4	update docs	2019-11-26 11:25:29 +01:00
MaxUlysse	25f6ab6dd9	add docs	2019-11-26 11:25:29 +01:00
Alexander Peltzer	aeb2fb6dc0	Fix all the markdownlinting errors	2019-11-26 00:48:17 +01:00
Alexander Peltzer	64a3240a51	Fix linting	2019-11-26 00:29:04 +01:00
Alexander Peltzer	b084b9ad3c	Adds in GitHub Actions tests	2019-11-26 00:25:49 +01:00
noirot	9e5b76827f	add genotoul in README.md	2019-11-25 16:37:00 +01:00
MaxUlysse	cb1c2eacd0	Z->S	2019-11-19 16:36:51 +01:00
MaxUlysse	08a6b74825	add new profile to be shared: awsbatch	2019-11-19 14:16:06 +01:00
Alexander Peltzer	3b6c9d0360	Fix denbi docs	2019-11-11 12:28:45 +01:00
phue	5a9dbe5d7c	MENDEL is no more ... the cluster is no longer operational, was replaced by CBE	2019-10-28 14:11:34 +01:00
Anthony Bretaudeau	1f2786c78f	add genouest cluster	2019-10-16 18:15:04 +02:00
phue	5e257e7e9a	add cbe profile	2019-09-22 16:45:09 +02:00
Martin Proks	da2a9047b0	fix: added kraken to the list (#64)	2019-08-05 14:59:36 +02:00
drpatelh	daf1b9dcd2	Fix type in uppmax-devel	2019-07-31 22:09:30 +01:00
drpatelh	840a97ed68	Clean up and alphabetasize	2019-07-31 21:52:16 +01:00
Remi Planel	1c0d596582	Merge remote-tracking branch 'upstream/master'	2019-07-30 16:15:20 +02:00
Remi Planel	f9a2baf614	Add link to Pasteur doc	2019-07-30 16:10:33 +02:00
marchoeppner	7d5de651aa	Update README.md ... Co-Authored-By: Harshil Patel <drpatelh@users.noreply.github.com>	2019-07-29 12:45:08 +02:00
marchoeppner	b31db18dfb	Adding config file for CCGA dx cluster	2019-07-29 12:08:07 +02:00
Alexander Peltzer	515e9484de	Merge pull request #44 from drpatelh/dev ... Add proper nf-core logo	2019-06-01 12:36:57 +02:00
drpatelh	ac804859f4	Add nf-core logo	2019-05-31 00:47:06 +01:00
Tobias Schraink	b6c1d3ba51	added bigpurple and prince doc links in README	2019-04-18 14:23:17 -04:00
Phil Ewels	1191863e1c	Removed params.config_profile_name, added params.hostnames	2019-03-13 17:19:34 +01:00
Phil Ewels	1e2c0c3e04	Merge pull request #29 from apeltzer/master ... iGenomes Rollout on "Binac" too	2019-03-11 18:26:19 +01:00
Phil Ewels	ef1aeafef6	Remove incorrect comment in code example	2019-03-08 16:41:47 +01:00
Alexander Peltzer	c8c150d67c	Add the TravisCI badge as we have tests now	2019-03-08 13:39:25 +01:00
Phil Ewels	d115909343	Tyop	2019-03-05 16:53:59 +01:00
Phil Ewels	e0ba8e6f07	Tweak the readme	2019-03-05 16:28:10 +01:00
Phil Ewels	9fb5715c4c	Added support for new params.custom_config_base option	2019-03-05 16:12:39 +01:00