praveenraj2018
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e4410065f3
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Merge pull request #306 from praveenraj2018/rnavar_munin
Added rnavar pipeline config for Munin
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2021-12-14 16:10:59 +01:00 |
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Maxime U. Garcia
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5e92e2ef11
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Update conf/pipeline/rnavar/munin.config
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2021-12-14 16:10:31 +01:00 |
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Praveen
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4c6e7262c2
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Updated README.md
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2021-12-14 04:04:17 +01:00 |
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Praveen
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cc1fe5b5a0
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Addressed review feedback
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2021-12-14 03:58:54 +01:00 |
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Praveen
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b4d5330c0e
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Added rnavar pipeline config for Munin
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2021-12-14 03:52:37 +01:00 |
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PCQ
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3a61adb69b
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Rename Marvin.conf to marvin.conf
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2021-12-13 11:38:48 +01:00 |
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PCQ
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2d02848075
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added marvin.md link
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2021-12-10 17:40:44 +01:00 |
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PCQ
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a72f1a243c
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Create marvin.md
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2021-12-10 17:39:32 +01:00 |
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PCQ
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a8bdd102e2
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added path to Marvin.conf
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2021-12-10 17:13:47 +01:00 |
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PCQ
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50d90cd686
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Marvin Cluster addition
Added the config for the Marvin cluster of the Universitat Pompeu Fabra (UPF)
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2021-12-10 17:11:43 +01:00 |
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James A. Fellows Yates
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71b17ff970
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Merge pull request #301 from jfy133/eva
eager@eva: and bump the second samtools_flagstat process overhead 🙄
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2021-12-07 11:04:33 +01:00 |
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James A. Fellows Yates
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55f452d81e
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Update eva.config
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2021-12-07 09:27:28 +01:00 |
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James A. Fellows Yates
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f7b5a8e800
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Merge pull request #300 from jfy133/eva
eager @ eva: reintroduce bionode8, bump overhead for flagstat
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2021-12-03 11:16:24 +01:00 |
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James Fellows Yates
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e8252ad61c
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Reintroduce bionode8, bump overhead for flagstat
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2021-12-03 08:36:31 +01:00 |
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James A. Fellows Yates
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f8246b8554
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Merge pull request #299 from jfy133/eva
Exclude bionode8 for eager@eva
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2021-12-02 10:57:44 +01:00 |
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James Fellows Yates
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06b40798c0
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Exclude bionode8
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2021-12-02 10:35:35 +01:00 |
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Venkat Malladi
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7a49a66b36
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Merge pull request #298 from vsmalladi/azure
Fix Azure Markdown
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2021-11-18 23:52:24 -06:00 |
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Edmund Miller
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61c7a9c4f1
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chore: Change to one template
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2021-11-18 21:23:21 -06:00 |
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Edmund Miller
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2c45f2a124
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Apply suggestions from code review
Co-authored-by: Phil Ewels <phil.ewels@scilifelab.se>
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2021-11-18 21:18:34 -06:00 |
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Venkat Malladi
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d722e7206e
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Fix readme to remove blob account.
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2021-11-18 18:06:54 -06:00 |
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Venkat Malladi
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c0bf71bb6c
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Merge branch 'master' into azure
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2021-11-18 18:06:04 -06:00 |
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Phil Ewels
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0725e8d382
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Merge pull request #225 from jfy133/doc-update
Make more explicit which files you must update
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2021-11-19 00:56:50 +01:00 |
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Phil Ewels
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4785ceccba
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Merge pull request #245 from ikeller/unibe_ibu
Unibe ibu
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2021-11-19 00:56:25 +01:00 |
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Phil Ewels
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291fcb20a5
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Merge pull request #297 from vsmalladi/azure
Add in template for Azure Workflow
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2021-11-19 00:55:54 +01:00 |
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Venkat Malladi
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1312949768
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Merge branch 'azure' of github.com:vsmalladi/configs into azure
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2021-11-18 17:55:37 -06:00 |
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Venkat Malladi
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46182c7439
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Fix markdown linting erros.
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2021-11-18 17:55:16 -06:00 |
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Phil Ewels
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b25bd1ce42
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Update docs/azurebatch.md
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2021-11-19 00:54:39 +01:00 |
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Venkat Malladi
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72ccd44ad6
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Remove storage name.
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2021-11-18 17:52:51 -06:00 |
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Venkat Malladi
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ed4c1d5f22
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Remove work_dir option.
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2021-11-18 17:52:24 -06:00 |
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Phil Ewels
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286fa6753a
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Apply suggestions from code review
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2021-11-19 00:07:33 +01:00 |
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Phil Ewels
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e090bbd5fe
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Merge pull request #241 from asafpr/master
replaced owner in JAX
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2021-11-19 00:03:11 +01:00 |
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Phil Ewels
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a26b3bf1e3
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Merge branch 'master' into unibe_ibu
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2021-11-19 00:02:30 +01:00 |
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Phil Ewels
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15080d958e
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Merge pull request #283 from aunderwo/master
change max_time diretcive in the correct place
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2021-11-19 00:00:52 +01:00 |
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Venkat Malladi
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13a8d7aebe
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Fix spelling.
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2021-11-18 15:51:12 -06:00 |
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Venkat Malladi
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f25dc57f00
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Fix headers.
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2021-11-18 15:50:12 -06:00 |
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Venkat Malladi
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1dacc2f3fe
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Fix liniting errors in headers.
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2021-11-18 15:49:08 -06:00 |
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Venkat Malladi
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845a9ce971
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Update Readme with more inforamtion on the options.
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2021-11-18 15:47:27 -06:00 |
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Venkat Malladi
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219244f1b4
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Add in sample datastorage for Illumina Platinum genomes.
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2021-11-18 15:28:34 -06:00 |
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Venkat Malladi
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b1a9c2e4c6
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Add in fake key.
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2021-11-18 15:20:59 -06:00 |
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Venkat Malladi
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a8075ee938
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Fix configuration to pass.
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2021-11-18 15:15:23 -06:00 |
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Venkat Malladi
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237f91a3b7
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Add in minmum config for azure.
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2021-11-18 14:51:39 -06:00 |
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Maxime U. Garcia
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0866682e9b
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Merge pull request #296 from drpatelh/hostnames
Add Chris as main contact at The Crick
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2021-11-03 13:30:51 +01:00 |
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Harshil Patel
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a098ad9e06
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Add Chris as main contact at The Crick
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2021-11-03 11:11:05 +00:00 |
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Phil Ewels
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556a1cf344
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Merge pull request #294 from ewels/master
UPPMAX profile - minor tweaks
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2021-11-03 00:02:17 +01:00 |
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Phil Ewels
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501db6bd2b
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Update conf/uppmax.config
Co-authored-by: Mahesh Binzer-Panchal <mahesh.binzer-panchal@nbis.se>
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2021-11-02 23:55:27 +01:00 |
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Phil Ewels
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448c662d20
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Merge pull request #295 from drpatelh/hostnames
Change params.hostnames from map to string
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2021-11-02 15:29:13 +01:00 |
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Phil Ewels
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c842ca70a7
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Address review comments
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2021-11-02 13:32:19 +01:00 |
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Harshil Patel
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7aff8923ea
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Test remove params.hostnames entirely
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2021-11-02 10:52:14 +00:00 |
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Harshil Patel
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adeff52f89
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Change params.hostnames from map to string
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2021-11-02 10:37:53 +00:00 |
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Phil Ewels
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9a17fdb6d9
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Update conf/uppmax.config
Co-authored-by: Mahesh Binzer-Panchal <mahesh.binzer-panchal@nbis.se>
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2021-11-02 09:58:04 +01:00 |
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