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Author	SHA1	Message	Date
Alexander Peltzer	5806cd14e8	Merge branch 'master' of https://github.com/nf-core/configs	2019-11-26 15:36:07 +01:00
Alexander Peltzer	caa979f102	Merge pull request #86 from genotoul-bioinfo/master ... Add genotoul config	2019-11-26 15:31:02 +01:00
Alexander Peltzer	9e6e4343d7	Merge branch 'master' into master	2019-11-26 15:13:32 +01:00
Alexander Peltzer	9cb5137ef2	Better description	2019-11-26 15:12:42 +01:00
Phil Ewels	171c103e20	Merge pull request #92 from apeltzer/master ... GithubActions: Ignore CZI Profiles for now	2019-11-26 15:11:49 +01:00
Noirot Céline	0fdcf8c70c	Update .github/workflows/main.yml ... Co-Authored-By: Alexander Peltzer <apeltzer@users.noreply.github.com>	2019-11-26 15:10:13 +01:00
Alexander Peltzer	5c39c1ed1a	Merge branch 'master' into master	2019-11-26 15:07:31 +01:00
noirot	07b1f17d6a	correct md to pass linter	2019-11-26 15:02:06 +01:00
noirot	3d8da62db3	add genotoul profile name to the build matrix	2019-11-26 14:57:17 +01:00
Noirot Céline	3ed206b7a7	Update docs/genotoul.md ... ok Co-Authored-By: Maxime Garcia <maxime.garcia@scilifelab.se>	2019-11-26 14:52:45 +01:00
Noirot Céline	288294994e	Update docs/genotoul.md ... ok Co-Authored-By: Maxime Garcia <maxime.garcia@scilifelab.se>	2019-11-26 14:52:32 +01:00
Noirot Céline	611c318569	Update conf/genotoul.config ... Co-Authored-By: Maxime Garcia <maxime.garcia@scilifelab.se>	2019-11-26 14:50:05 +01:00
Noirot Céline	dd4ff452da	Update conf/genotoul.config ... Co-Authored-By: Maxime Garcia <maxime.garcia@scilifelab.se>	2019-11-26 14:49:47 +01:00
noirot	e95196451f	correct md to pass linter	2019-11-26 14:47:23 +01:00
noirot	42c949db95	correct md to pass linter	2019-11-26 14:43:42 +01:00
Alexander Peltzer	bac91d03fa	Ignore czi stuff for now	2019-11-26 14:38:57 +01:00
Alexander Peltzer	8ca2e808b4	Merge pull request #91 from apeltzer/master ... Fix Github Actions tests	2019-11-26 14:34:53 +01:00
Alexander Peltzer	37c6714cc7	Nice prince	2019-11-26 14:29:52 +01:00
Alexander Peltzer	2ebd2180ed	Add in SCRATCH env	2019-11-26 14:27:22 +01:00
Alexander Peltzer	23f9fd2d73	Merge branch 'master' into master	2019-11-26 14:20:36 +01:00
Alexander Peltzer	47ac2085f7	Better names	2019-11-26 14:12:41 +01:00
Alexander Peltzer	0afe00ded5	Generalize name	2019-11-26 14:12:19 +01:00
Alexander Peltzer	c3c7c74d79	Better code	2019-11-26 14:11:16 +01:00
Alexander Peltzer	dea11df453	Both on PR and on push	2019-11-26 14:07:25 +01:00
Alexander Peltzer	ebb89f2714	Don't check that anymore	2019-11-26 14:06:30 +01:00
Alexander Peltzer	cfc30418b2	Merge branch 'master' of https://github.com/apeltzer/configs	2019-11-26 14:05:09 +01:00
Alexander Peltzer	9caf9821c9	Use strip	2019-11-26 14:04:58 +01:00
Alexander Peltzer	d592c79954	Merge branch 'master' into master	2019-11-26 13:59:06 +01:00
Alexander Peltzer	cb876594a3	Proper user tests now :-)	2019-11-26 13:57:32 +01:00
Noirot Céline	42d99e7006	Update genotoul.md	2019-11-26 13:18:34 +01:00
Alexander Peltzer	00db62416f	Merge pull request #89 from MaxUlysse/AWSBATCH ... Fix issues with awsbatch profile	2019-11-26 11:23:15 +01:00
Maxime Garcia	1ce8ce0c55	Apply suggestions from code review	2019-11-26 11:00:24 +01:00
MaxUlysse	75c1fd5cd9	fix tests	2019-11-26 10:43:23 +01:00
Alexander Peltzer	7e3efcac5c	Enjoy	2019-11-26 00:59:09 +01:00
Alexander Peltzer	b60fa8109e	Shift some configs to params scope	2019-11-26 00:57:10 +01:00
Alexander Peltzer	3d7f5436b1	Its in workflows	2019-11-26 00:54:17 +01:00
Alexander Peltzer	5a1dbf2dc7	Rename configs tests	2019-11-26 00:52:39 +01:00
Alexander Peltzer	4062c8b4dc	Fix indentation	2019-11-26 00:51:08 +01:00
Alexander Peltzer	aeb2fb6dc0	Fix all the markdownlinting errors	2019-11-26 00:48:17 +01:00
Alexander Peltzer	2d16917473	Fix linting	2019-11-26 00:34:55 +01:00
Alexander Peltzer	64a3240a51	Fix linting	2019-11-26 00:29:04 +01:00
Alexander Peltzer	b084b9ad3c	Adds in GitHub Actions tests	2019-11-26 00:25:49 +01:00
noirot	9e5b76827f	add genotoul in README.md	2019-11-25 16:37:00 +01:00
Noirot Céline	ed4436c1a6	Merge branch 'master' into master	2019-11-25 16:24:12 +01:00
noirot	42d968fd2a	add genotoul in nfcore_custom	2019-11-25 16:23:25 +01:00
noirot	db51c49b2f	Add genotoul config	2019-11-25 14:54:25 +01:00
Maxime Garcia	a283c5b7c4	Merge pull request #71 from MaxUlysse/master ... Add profiles that should be shared with all pipelines to configs	2019-11-19 19:43:50 +01:00
MaxUlysse	cb1c2eacd0	Z->S	2019-11-19 16:36:51 +01:00
MaxUlysse	08a6b74825	add new profile to be shared: awsbatch	2019-11-19 14:16:06 +01:00
Alexander Peltzer	bc9ecf50ac	Update binac.config ... Upgrade to 3.4.2	2019-11-11 13:56:17 +01:00