119 commits

Author	SHA1	Message	Date
Alexander Peltzer	b8d020b78c	Update cfc.md	2020-03-09 15:12:49 +01:00
Evan Floden	6141e008a3	Update google.md	2020-03-09 14:44:58 +01:00
Evan Floden	d8ad376f71	Merge branch 'master' into master	2020-03-06 10:29:50 +00:00
Evan Floden	f5364e45e7	Update google.md or markdown linting	2020-03-06 11:27:44 +01:00
Alexander Peltzer	59a787b179	Merge pull request #122 from marchoeppner/ccga-config ... Removing old CCGA profile from docs and linting	2020-03-06 11:17:08 +01:00
mseybold	2135996b13	Update cfc.md	2020-03-06 11:12:21 +01:00
Evan Floden	87e8da61a4	Readme formatting	2020-03-06 05:58:59 +00:00
Evan Floden	8a9d3ad8a0	First commit of Google Cloud config	2020-03-06 05:47:29 +00:00
Marc Hoeppner	6c5a5c8bcb	Removing old CCGA profile from docs and linting ... Removing CCGA profile from master config Removing CCGA profile from master config	2020-02-24 12:16:33 +01:00
Maxime Garcia	08e2804b37	Merge branch 'master' into Uppmax	2020-02-20 17:18:46 +01:00
MaxUlysse	aa905cd645	add UPPMAX specific sarek config	2020-02-20 17:14:18 +01:00
marchoeppner	0830203b70	Adding new CCGA Med Cluster to profiles ... Updating README and fixing linting errors in CCGA_MED profile Fixing order in profile queue and removed leading slash from readme for ccga profile docs Fixing order in profile queue and removed leading slash from readme for ccga profile docs	2020-02-11 11:12:51 +01:00
James A. Fellows Yates	799f2d5788	Grammar tweak	2019-12-21 20:59:48 +01:00
James A. Fellows Yates	435a5892ea	Updated docs corresponding to 638758423a	2019-12-21 20:59:25 +01:00
drpatelh	bcb8950c2f	Change URL to website	2019-12-18 10:57:12 +00:00
drpatelh	be5ed21269	Update docs	2019-12-18 10:54:31 +00:00
drpatelh	0779d25255	Update docs	2019-12-12 13:02:51 +00:00
Alexander Peltzer	a6d08ed646	Adjust custom pipeline config for ampliseq on BINAC	2019-12-11 16:09:44 +01:00
Maxime Garcia	9497b78149	Merge pull request #100 from MaxUlysse/UPPMAX ... Improve UPPMAX configs	2019-12-06 10:52:44 +01:00
Maxime Garcia	79528de92f	Update docs/uppmax.md ... Co-Authored-By: Phil Ewels <phil.ewels@scilifelab.se>	2019-12-06 10:47:09 +01:00
jfy133	1650080b6e	Linting	2019-12-05 17:03:07 +01:00
jfy133	731372dac2	Added SHH specific EAGER configuration	2019-12-05 17:01:10 +01:00
MaxUlysse	a63ec24626	Merge branch 'UPPMAX' of github.com:MaxUlysse/nf-core_configs into UPPMAX	2019-12-05 15:18:04 +01:00
MaxUlysse	99afe86ea9	update docs	2019-12-05 15:18:01 +01:00
Maxime Garcia	78826c9d4e	Merge branch 'master' into UPPMAX	2019-12-05 12:52:34 +01:00
Alexander Peltzer	9cdb915efb	Merge pull request #101 from jfy133/master ... Condensing SHH profile(s) with sub-profiles	2019-12-05 12:51:31 +01:00
jfy133	54dafbcfa3	Condensing SHH profiles following https://github.com/nf-core/configs/pull/100	2019-12-05 12:09:11 +01:00
MaxUlysse	cdbdbee0eb	replace -profile uppmax_devel by -profile uppmax,devel	2019-12-05 11:49:44 +01:00
Maxime Garcia	2669401a72	Merge branch 'master' into sarek	2019-11-27 13:27:43 +01:00
James A. Fellows Yates	c725c71e4d	Merge branch 'master' into master	2019-11-26 20:34:42 +01:00
jfy133	6f40c13473	Split shh config for each cluster	2019-11-26 20:20:17 +01:00
phue	672f025639	cbe: add documentation about iGenomes	2019-11-26 18:09:20 +01:00
Alexander Peltzer	81739a3907	Merge pull request #93 from jfy133/master ... Updated max resources for SHH SDAG	2019-11-26 15:56:39 +01:00
James A. Fellows Yates	89506a653c	Remove empty lines in block quotes for linting	2019-11-26 15:34:25 +01:00
James A. Fellows Yates	12ec22838c	Specified max sources currently at SDAG limits (exceeds cdag)	2019-11-26 15:29:03 +01:00
noirot	07b1f17d6a	correct md to pass linter	2019-11-26 15:02:06 +01:00
Noirot Céline	3ed206b7a7	Update docs/genotoul.md ... ok Co-Authored-By: Maxime Garcia <maxime.garcia@scilifelab.se>	2019-11-26 14:52:45 +01:00
Noirot Céline	288294994e	Update docs/genotoul.md ... ok Co-Authored-By: Maxime Garcia <maxime.garcia@scilifelab.se>	2019-11-26 14:52:32 +01:00
noirot	e95196451f	correct md to pass linter	2019-11-26 14:47:23 +01:00
noirot	42c949db95	correct md to pass linter	2019-11-26 14:43:42 +01:00
Alexander Peltzer	23f9fd2d73	Merge branch 'master' into master	2019-11-26 14:20:36 +01:00
Noirot Céline	42d99e7006	Update genotoul.md	2019-11-26 13:18:34 +01:00
Maxime Garcia	f6c2e4c65f	Update docs/pipeline/sarek/munin.md ... Update conf/pipeline/sarek/munin.config testing out module and containers collision	2019-11-26 11:57:51 +01:00
MaxUlysse	25d4e92935	update docs	2019-11-26 11:55:36 +01:00
Maxime Garcia	b029ccaa59	Update docs/pipeline/sarek/munin.md ... Update conf/pipeline/sarek/munin.config	2019-11-26 11:48:11 +01:00
MaxUlysse	283abcece4	update docs	2019-11-26 11:25:29 +01:00
MaxUlysse	cd1d0b5f8f	Add specific sarek config base, munin specific sarek config and docs ... rename file improve configs remove unnecessary params	2019-11-26 11:25:29 +01:00
Alexander Peltzer	aeb2fb6dc0	Fix all the markdownlinting errors	2019-11-26 00:48:17 +01:00
Noirot Céline	ed4436c1a6	Merge branch 'master' into master	2019-11-25 16:24:12 +01:00
noirot	db51c49b2f	Add genotoul config	2019-11-25 14:54:25 +01:00