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1697 commits 4 branches 0 tags 1.9 MiB
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164 commits

Author SHA1 Message Date
Maxime Garcia
08e2804b37
Merge branch 'master' into Uppmax 2020-02-20 17:18:46 +01:00
MaxUlysse
aa905cd645 add UPPMAX specific sarek config 2020-02-20 17:14:18 +01:00
Harshil Patel
ef8534d481
Update README.md 2020-02-11 11:57:04 +00:00
marchoeppner
0830203b70 Adding new CCGA Med Cluster to profiles 
Updating README and fixing linting errors in CCGA_MED profile

Fixing order in profile queue and removed leading slash from readme for ccga profile docs

Fixing order in profile queue and removed leading slash from readme for ccga profile docs
 2020-02-11 11:12:51 +01:00
Alexander Peltzer
ecc850fd83
Omit this in TOC 2019-12-11 16:13:15 +01:00
Alexander Peltzer
a6d08ed646
Adjust custom pipeline config for ampliseq on BINAC 2019-12-11 16:09:44 +01:00
James A. Fellows Yates
71b47e3efa
Updated README to include EAGER specific configs 2019-12-10 11:39:24 +01:00
MaxUlysse
cdbdbee0eb replace -profile uppmax_devel by -profile uppmax,devel 2019-12-05 11:49:44 +01:00
Maxime Garcia
2669401a72
Merge branch 'master' into sarek 2019-11-27 13:27:43 +01:00
MaxUlysse
752fca0530 fix level of hostname 2019-11-27 13:25:52 +01:00
MaxUlysse
7f61d2f81b fix TOC 2019-11-27 13:18:39 +01:00
MaxUlysse
8a73e7f2f8 better explanation 2019-11-27 13:16:08 +01:00
Alexander Peltzer
da922b8005
Fix README 2019-11-26 15:45:33 +01:00
Alexander Peltzer
5806cd14e8
Merge branch 'master' of https://github.com/nf-core/configs 2019-11-26 15:36:07 +01:00
Alexander Peltzer
9cb5137ef2
Better description 2019-11-26 15:12:42 +01:00
Alexander Peltzer
23f9fd2d73
Merge branch 'master' into master 2019-11-26 14:20:36 +01:00
Maxime Garcia
68c709432f
Apply suggestions from code review 
Co-Authored-By: Phil Ewels <phil.ewels@scilifelab.se>
 2019-11-26 14:17:32 +01:00
Maxime Garcia
f4115bc1a9
Update README.md 
Co-Authored-By: Phil Ewels <phil.ewels@scilifelab.se>
 2019-11-26 14:10:05 +01:00
MaxUlysse
209763620a update README 2019-11-26 11:48:29 +01:00
Maxime Garcia
29f0442c3a Update README.md 
Co-Authored-By: James A. Fellows Yates <jfy133@users.noreply.github.com>
 2019-11-26 11:48:29 +01:00
MaxUlysse
283abcece4 update docs 2019-11-26 11:25:29 +01:00
MaxUlysse
25f6ab6dd9 add docs 2019-11-26 11:25:29 +01:00
Alexander Peltzer
aeb2fb6dc0
Fix all the markdownlinting errors 2019-11-26 00:48:17 +01:00
Alexander Peltzer
64a3240a51
Fix linting 2019-11-26 00:29:04 +01:00
Alexander Peltzer
b084b9ad3c
Adds in GitHub Actions tests 2019-11-26 00:25:49 +01:00
noirot
9e5b76827f add genotoul in README.md 2019-11-25 16:37:00 +01:00
MaxUlysse
cb1c2eacd0 Z->S 2019-11-19 16:36:51 +01:00
MaxUlysse
08a6b74825 add new profile to be shared: awsbatch 2019-11-19 14:16:06 +01:00
Alexander Peltzer
3b6c9d0360
Fix denbi docs 2019-11-11 12:28:45 +01:00
phue
5a9dbe5d7c MENDEL is no more 
the cluster is no longer operational, was replaced by CBE
 2019-10-28 14:11:34 +01:00
Anthony Bretaudeau
1f2786c78f add genouest cluster 2019-10-16 18:15:04 +02:00
phue
5e257e7e9a add cbe profile 2019-09-22 16:45:09 +02:00
Martin Proks
da2a9047b0
fix: added kraken to the list (#64) 2019-08-05 14:59:36 +02:00
drpatelh
daf1b9dcd2 Fix type in uppmax-devel 2019-07-31 22:09:30 +01:00
drpatelh
840a97ed68 Clean up and alphabetasize 2019-07-31 21:52:16 +01:00
Remi Planel
1c0d596582 Merge remote-tracking branch 'upstream/master' 2019-07-30 16:15:20 +02:00
Remi Planel
f9a2baf614 Add link to Pasteur doc 2019-07-30 16:10:33 +02:00
marchoeppner
7d5de651aa
Update README.md 
Co-Authored-By: Harshil Patel <drpatelh@users.noreply.github.com>
 2019-07-29 12:45:08 +02:00
marchoeppner
b31db18dfb Adding config file for CCGA dx cluster 2019-07-29 12:08:07 +02:00
Alexander Peltzer
515e9484de
Merge pull request #44 from drpatelh/dev 
Add proper nf-core logo
 2019-06-01 12:36:57 +02:00
drpatelh
ac804859f4 Add nf-core logo 2019-05-31 00:47:06 +01:00
Tobias Schraink
b6c1d3ba51 added bigpurple and prince doc links in README 2019-04-18 14:23:17 -04:00
Phil Ewels
1191863e1c Removed params.config_profile_name, added params.hostnames 2019-03-13 17:19:34 +01:00
Phil Ewels
1e2c0c3e04
Merge pull request #29 from apeltzer/master 
iGenomes Rollout on "Binac" too
 2019-03-11 18:26:19 +01:00
Phil Ewels
ef1aeafef6
Remove incorrect comment in code example 2019-03-08 16:41:47 +01:00
Alexander Peltzer
c8c150d67c Add the TravisCI badge as we have tests now 2019-03-08 13:39:25 +01:00
Phil Ewels
d115909343 Tyop 2019-03-05 16:53:59 +01:00
Phil Ewels
e0ba8e6f07 Tweak the readme 2019-03-05 16:28:10 +01:00
Phil Ewels
9fb5715c4c Added support for new params.custom_config_base option 2019-03-05 16:12:39 +01:00
Martin Proks
548c8bca3f
Updated munin doc and configuration 2019-01-10 15:46:16 +01:00
Alexander Peltzer
bcd85940fa Add Template for Documentation of Cluster Resources 2019-01-04 17:12:59 +01:00
Alexander Peltzer
ef41306a9f List cluster configs in README properly 2019-01-04 16:44:43 +01:00
Alexander Peltzer
65a24c93a2 Typo fix 2019-01-04 16:39:02 +01:00
Alexander Peltzer
45b46fffe8 Add some documentation on config description parameters 2019-01-04 16:38:41 +01:00
drpatelh
4663c58326 Removed travis and codecov badges 2018-12-05 11:10:54 +00:00
drpatelh
1d5ceb6a0b Minor modifications 2018-11-29 17:49:03 +00:00
drpatelh
990780c3bb Split sections into using and creating 2018-11-29 17:41:54 +00:00
drpatelh
a04524ad48 Restructured sections 2018-11-29 15:26:08 +00:00
drpatelh
68180748e6 Slight restructuring 2018-11-29 14:54:20 +00:00
drpatelh
19526e45e8 Removed code highlighting for Slack 2018-11-29 14:50:15 +00:00
drpatelh
5e157328c7 Fixed a couple of issues 2018-11-29 12:20:25 +00:00
drpatelh
5abf477802 Added detailed description for creating and uploading config 2018-11-29 12:14:33 +00:00
drpatelh
0c598846e0 Modified README and added crick config 2018-11-27 09:17:55 +00:00
Harshil Patel
ed3167c2a1
Initial commit 2018-11-23 14:37:08 +00:00