Alexander Peltzer
|
da547b4ce3
|
Merge pull request #102 from phue/cbe_singularity
cbe: load singularity/3.4.1
|
2019-12-06 10:21:55 +01:00 |
|
jfy133
|
731372dac2
|
Added SHH specific EAGER configuration
|
2019-12-05 17:01:10 +01:00 |
|
phue
|
381c60e7b7
|
cbe: load singularity/3.4.1
|
2019-12-05 16:06:32 +01:00 |
|
Alexander Peltzer
|
9cdb915efb
|
Merge pull request #101 from jfy133/master
Condensing SHH profile(s) with sub-profiles
|
2019-12-05 12:51:31 +01:00 |
|
James A. Fellows Yates
|
842642a2bb
|
Apply suggestions from code review
Co-Authored-By: Maxime Garcia <maxime.garcia@scilifelab.se>
|
2019-12-05 12:23:36 +01:00 |
|
James A. Fellows Yates
|
678a3841b6
|
Update conf/shh.config
Co-Authored-By: Maxime Garcia <maxime.garcia@scilifelab.se>
|
2019-12-05 12:23:06 +01:00 |
|
jfy133
|
54dafbcfa3
|
Condensing SHH profiles following https://github.com/nf-core/configs/pull/100
|
2019-12-05 12:09:11 +01:00 |
|
Sabrina Krakau
|
2eed8f7429
|
Lowered max. memory for cfc
|
2019-11-28 12:49:02 +01:00 |
|
Olga Botvinnik
|
f57e00e87d
|
Set awsqueue parameter properly
|
2019-11-27 15:57:09 -08:00 |
|
Alexander Peltzer
|
4f77eae5cf
|
Mini adjustment for highmem queue on denbi
|
2019-11-27 14:23:01 +01:00 |
|
Maxime Garcia
|
2669401a72
|
Merge branch 'master' into sarek
|
2019-11-27 13:27:43 +01:00 |
|
Alexander Peltzer
|
5e0e3e0567
|
Merge pull request #96 from jfy133/master
Splitting SHH config to one per cluster
|
2019-11-27 12:06:54 +01:00 |
|
Alexander Peltzer
|
54719c4761
|
Merge pull request #95 from ggabernet/master
Update max memory for cfc profile
|
2019-11-26 21:21:07 +01:00 |
|
James A. Fellows Yates
|
c725c71e4d
|
Merge branch 'master' into master
|
2019-11-26 20:34:42 +01:00 |
|
jfy133
|
6f40c13473
|
Split shh config for each cluster
|
2019-11-26 20:20:17 +01:00 |
|
phue
|
88b5be3060
|
Merge branch 'master' of https://github.com/nf-core/configs into cbe_iGenomes
|
2019-11-26 18:08:43 +01:00 |
|
ggabernet
|
834f4b4179
|
updated memory cfc config
|
2019-11-26 17:30:41 +01:00 |
|
Alexander Peltzer
|
ee99d7f2d4
|
Merge pull request #94 from apeltzer/master
Mini Cosmetic Fixes for README
|
2019-11-26 16:24:30 +01:00 |
|
Alexander Peltzer
|
b756ce54a4
|
Add genotoul fix
|
2019-11-26 16:09:08 +01:00 |
|
Alexander Peltzer
|
81739a3907
|
Merge pull request #93 from jfy133/master
Updated max resources for SHH SDAG
|
2019-11-26 15:56:39 +01:00 |
|
James A. Fellows Yates
|
c3d27099ca
|
Updated authors
|
2019-11-26 15:26:05 +01:00 |
|
James A. Fellows Yates
|
ca6ddcadb0
|
Matching max CPUs to SDAG (supercruncher8)
|
2019-11-26 15:25:35 +01:00 |
|
MaxUlysse
|
6f638b7ad4
|
Merge branch 'sarek' of github.com:MaxUlysse/nf-core_configs into sarek
|
2019-11-26 15:22:02 +01:00 |
|
MaxUlysse
|
25f3bd68f8
|
container = null
|
2019-11-26 15:21:53 +01:00 |
|
Alexander Peltzer
|
5c39c1ed1a
|
Merge branch 'master' into master
|
2019-11-26 15:07:31 +01:00 |
|
Noirot Céline
|
611c318569
|
Update conf/genotoul.config
Co-Authored-By: Maxime Garcia <maxime.garcia@scilifelab.se>
|
2019-11-26 14:50:05 +01:00 |
|
Noirot Céline
|
dd4ff452da
|
Update conf/genotoul.config
Co-Authored-By: Maxime Garcia <maxime.garcia@scilifelab.se>
|
2019-11-26 14:49:47 +01:00 |
|
Alexander Peltzer
|
37c6714cc7
|
Nice prince
|
2019-11-26 14:29:52 +01:00 |
|
phue
|
bdf4a829b8
|
roll out iGenomes on cbe
|
2019-11-26 14:22:16 +01:00 |
|
Alexander Peltzer
|
23f9fd2d73
|
Merge branch 'master' into master
|
2019-11-26 14:20:36 +01:00 |
|
Maxime Garcia
|
68c709432f
|
Apply suggestions from code review
Co-Authored-By: Phil Ewels <phil.ewels@scilifelab.se>
|
2019-11-26 14:17:32 +01:00 |
|
Alexander Peltzer
|
d592c79954
|
Merge branch 'master' into master
|
2019-11-26 13:59:06 +01:00 |
|
MaxUlysse
|
ebdfc2a768
|
fix container/module collision
|
2019-11-26 11:59:00 +01:00 |
|
Maxime Garcia
|
880551d246
|
Apply suggestions from code review
|
2019-11-26 11:58:13 +01:00 |
|
Maxime Garcia
|
f6c2e4c65f
|
Update docs/pipeline/sarek/munin.md
Update conf/pipeline/sarek/munin.config
testing out module and containers collision
|
2019-11-26 11:57:51 +01:00 |
|
Maxime Garcia
|
9d23f7a266
|
Update conf/pipeline/sarek/munin.config
|
2019-11-26 11:56:02 +01:00 |
|
MaxUlysse
|
45cec1ac2f
|
Add specific sarek config base, munin specific sarek config and docs
rename file
improve configs
remove unnecessary params
|
2019-11-26 11:52:53 +01:00 |
|
MaxUlysse
|
028008c1d0
|
improve syntax
|
2019-11-26 11:48:29 +01:00 |
|
Maxime Garcia
|
93d5156c7d
|
Update conf/munin.config
|
2019-11-26 11:48:29 +01:00 |
|
MaxUlysse
|
e98f74e47b
|
actually belong to nf-core/configs/munin
|
2019-11-26 11:48:29 +01:00 |
|
MaxUlysse
|
edde1ee64d
|
fix container/module collision
|
2019-11-26 11:48:29 +01:00 |
|
Maxime Garcia
|
9a57e487d7
|
Apply suggestions from code review
|
2019-11-26 11:48:29 +01:00 |
|
Maxime Garcia
|
b029ccaa59
|
Update docs/pipeline/sarek/munin.md
Update conf/pipeline/sarek/munin.config
|
2019-11-26 11:48:11 +01:00 |
|
Maxime Garcia
|
73047968cf
|
Update conf/pipeline/sarek/munin.config
|
2019-11-26 11:25:29 +01:00 |
|
MaxUlysse
|
cd1d0b5f8f
|
Add specific sarek config base, munin specific sarek config and docs
rename file
improve configs
remove unnecessary params
|
2019-11-26 11:25:29 +01:00 |
|
Maxime Garcia
|
1ce8ce0c55
|
Apply suggestions from code review
|
2019-11-26 11:00:24 +01:00 |
|
MaxUlysse
|
75c1fd5cd9
|
fix tests
|
2019-11-26 10:43:23 +01:00 |
|
Alexander Peltzer
|
b60fa8109e
|
Shift some configs to params scope
|
2019-11-26 00:57:10 +01:00 |
|
Noirot Céline
|
ed4436c1a6
|
Merge branch 'master' into master
|
2019-11-25 16:24:12 +01:00 |
|
noirot
|
db51c49b2f
|
Add genotoul config
|
2019-11-25 14:54:25 +01:00 |
|