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  • 2ebd2180ed
    Add in SCRATCH env Alexander Peltzer 2019-11-26 14:27:22 +0100
  • bdf4a829b8 roll out iGenomes on cbe phue 2019-11-26 14:22:16 +0100
  • 23f9fd2d73
    Merge branch 'master' into master Alexander Peltzer 2019-11-26 14:20:36 +0100
  • 68c709432f
    Apply suggestions from code review Maxime Garcia 2019-11-26 14:17:32 +0100
  • 47ac2085f7
    Better names Alexander Peltzer 2019-11-26 14:12:41 +0100
  • 0afe00ded5
    Generalize name Alexander Peltzer 2019-11-26 14:12:19 +0100
  • c3c7c74d79
    Better code Alexander Peltzer 2019-11-26 14:11:16 +0100
  • f4115bc1a9
    Update README.md Maxime Garcia 2019-11-26 14:10:05 +0100
  • dea11df453
    Both on PR and on push Alexander Peltzer 2019-11-26 14:07:25 +0100
  • ebb89f2714
    Don't check that anymore Alexander Peltzer 2019-11-26 14:06:30 +0100
  • cfc30418b2
    Merge branch 'master' of https://github.com/apeltzer/configs Alexander Peltzer 2019-11-26 14:05:09 +0100
  • 9caf9821c9
    Use strip Alexander Peltzer 2019-11-26 14:04:58 +0100
  • d592c79954
    Merge branch 'master' into master Alexander Peltzer 2019-11-26 13:59:06 +0100
  • cb876594a3
    Proper user tests now :-) Alexander Peltzer 2019-11-26 13:57:32 +0100
  • 42d99e7006
    Update genotoul.md Noirot Céline 2019-11-26 13:18:34 +0100
  • f9fe789ef4 update README MaxUlysse 2019-11-26 10:30:24 +0100
  • 89e6d8cd27 Update conf/munin.config Maxime Garcia 2019-11-22 13:55:08 +0100
  • 89de9a799e improve syntax MaxUlysse 2019-11-22 14:42:40 +0100
  • 52cacd6c97 Update README.md MaxUlysse 2019-11-26 12:00:40 +0100
  • 6c516282bc Update README.md Maxime Garcia 2019-11-21 15:25:12 +0100
  • d1c4ba89bd actually belong to nf-core/configs/munin MaxUlysse 2019-11-21 14:21:32 +0100
  • ebdfc2a768 fix container/module collision MaxUlysse 2019-11-20 16:03:27 +0100
  • 880551d246 Apply suggestions from code review Maxime Garcia 2019-11-20 16:00:05 +0100
  • f6c2e4c65f Update docs/pipeline/sarek/munin.md Maxime Garcia 2019-11-20 15:54:29 +0100
  • 9d23f7a266 Update conf/pipeline/sarek/munin.config Maxime Garcia 2019-11-20 15:53:49 +0100
  • 25d4e92935 update docs MaxUlysse 2019-11-20 15:32:35 +0100
  • 83f677216b Update pipeline/sarek.config Maxime Garcia 2019-11-20 15:13:13 +0100
  • 45cec1ac2f Add specific sarek config base, munin specific sarek config and docs MaxUlysse 2019-11-20 10:10:05 +0100
  • 209763620a update README MaxUlysse 2019-11-26 10:30:24 +0100
  • 028008c1d0 improve syntax MaxUlysse 2019-11-22 14:42:40 +0100
  • 93d5156c7d Update conf/munin.config Maxime Garcia 2019-11-22 13:55:08 +0100
  • 29f0442c3a Update README.md Maxime Garcia 2019-11-21 15:25:12 +0100
  • e98f74e47b actually belong to nf-core/configs/munin MaxUlysse 2019-11-21 14:21:32 +0100
  • edde1ee64d fix container/module collision MaxUlysse 2019-11-20 16:03:27 +0100
  • 9a57e487d7 Apply suggestions from code review Maxime Garcia 2019-11-20 16:00:05 +0100
  • b029ccaa59 Update docs/pipeline/sarek/munin.md Maxime Garcia 2019-11-20 15:54:29 +0100
  • 73047968cf Update conf/pipeline/sarek/munin.config Maxime Garcia 2019-11-20 15:53:49 +0100
  • 283abcece4 update docs MaxUlysse 2019-11-20 15:32:35 +0100
  • 43f6f55ba2 Update pipeline/sarek.config Maxime Garcia 2019-11-20 15:13:13 +0100
  • 25f6ab6dd9 add docs MaxUlysse 2019-11-20 14:34:06 +0100
  • cd1d0b5f8f Add specific sarek config base, munin specific sarek config and docs MaxUlysse 2019-11-20 10:10:05 +0100
  • 00db62416f
    Merge pull request #89 from MaxUlysse/AWSBATCH Alexander Peltzer 2019-11-26 11:23:15 +0100
  • 1ce8ce0c55
    Apply suggestions from code review Maxime Garcia 2019-11-26 11:00:24 +0100
  • 75c1fd5cd9 fix tests MaxUlysse 2019-11-26 10:43:23 +0100
  • 7e3efcac5c
    Enjoy Alexander Peltzer 2019-11-26 00:59:09 +0100
  • b60fa8109e
    Shift some configs to params scope Alexander Peltzer 2019-11-26 00:57:10 +0100
  • 3d7f5436b1
    Its in workflows Alexander Peltzer 2019-11-26 00:54:17 +0100
  • 5a1dbf2dc7
    Rename configs tests Alexander Peltzer 2019-11-26 00:52:39 +0100
  • 4062c8b4dc
    Fix indentation Alexander Peltzer 2019-11-26 00:51:08 +0100
  • aeb2fb6dc0
    Fix all the markdownlinting errors Alexander Peltzer 2019-11-26 00:48:17 +0100
  • 2d16917473
    Fix linting Alexander Peltzer 2019-11-26 00:34:55 +0100
  • 64a3240a51
    Fix linting Alexander Peltzer 2019-11-26 00:29:04 +0100
  • b084b9ad3c
    Adds in GitHub Actions tests Alexander Peltzer 2019-11-26 00:25:49 +0100
  • 9e5b76827f add genotoul in README.md noirot 2019-11-25 16:37:00 +0100
  • ed4436c1a6
    Merge branch 'master' into master Noirot Céline 2019-11-25 16:24:12 +0100
  • 42d968fd2a add genotoul in nfcore_custom noirot 2019-11-25 16:23:25 +0100
  • db51c49b2f Add genotoul config noirot 2019-11-25 14:54:25 +0100
  • a283c5b7c4
    Merge pull request #71 from MaxUlysse/master Maxime Garcia 2019-11-19 19:43:50 +0100
  • cb1c2eacd0 Z->S MaxUlysse 2019-11-19 16:36:51 +0100
  • 08a6b74825 add new profile to be shared: awsbatch MaxUlysse 2019-10-10 15:33:06 +0200
  • bc9ecf50ac
    Update binac.config Alexander Peltzer 2019-11-11 13:56:17 +0100
  • e66ca6f670
    Merge pull request #83 from nf-core/cfc_new_singularity_test Alexander Peltzer 2019-11-11 13:55:01 +0100
  • fd7bdecfb7
    Merge pull request #84 from apeltzer/master Alexander Peltzer 2019-11-11 12:29:11 +0100
  • 3b6c9d0360
    Fix denbi docs Alexander Peltzer 2019-11-11 12:28:45 +0100
  • f19ddb847d
    Merge pull request #79 from apeltzer/master Alexander Peltzer 2019-11-11 12:26:45 +0100
  • d2603a134e
    Add in denbi cloud configs Alexander Peltzer 2019-11-11 12:26:19 +0100
  • 426017d727
    Merge remote-tracking branch 'upstream/master' Alexander Peltzer 2019-11-11 12:21:53 +0100
  • 6790dbd4a3
    Merge pull request #82 from arontommi/dev Phil Ewels 2019-11-08 15:07:07 +0100
  • 5e7d13df89
    Update uppmax.md Phil Ewels 2019-11-08 10:59:34 +0100
  • 16a0ba9fd5
    Update cfc.config Alexander Peltzer 2019-11-08 10:06:23 +0100
  • 3f534c154e documentation on how to fix bianca cluster configuration problem arontommi 2019-11-06 13:10:09 +0100
  • 99f4d9b9bd documentation on how to fix bianca cluster configuration problem arontommi 2019-11-06 13:10:09 +0100
  • ebbf884ac5
    Merge pull request #81 from maxibor/master James A. Fellows Yates 2019-10-28 20:02:27 +0100
  • 47a7d57db4 update shh doc maxibor 2019-10-28 16:09:00 +0100
  • 84178c2550
    Merge pull request #80 from phue/remove_mendel Alexander Peltzer 2019-10-28 14:45:18 +0100
  • 5a9dbe5d7c MENDEL is no more phue 2019-10-28 14:11:34 +0100
  • eb6d23254d
    Fix binac resources Alexander Peltzer 2019-10-28 13:22:12 +0100
  • e557ced184
    Update max memory Alexander Peltzer 2019-10-28 13:21:41 +0100
  • 06bd1ab79e
    Merge branch 'master' into master Alexander Peltzer 2019-10-28 13:21:08 +0100
  • 41e607e7f9
    Fix expression Alexander Peltzer 2019-10-28 13:17:39 +0100
  • 494aa8b53e
    Mini fix Alexander Peltzer 2019-10-28 13:15:54 +0100
  • 9299355890
    Merge pull request #78 from nf-core/revert-43-master Alexander Peltzer 2019-10-28 13:12:42 +0100
  • 5348b8c609
    Revert "BINAC SMP / Short / Long Updates" Alexander Peltzer 2019-10-28 13:12:31 +0100
  • 7951805fbf
    Merge pull request #43 from apeltzer/master Alexander Peltzer 2019-10-28 13:09:56 +0100
  • 83fcc0b2ba
    Adjust max memory Alexander Peltzer 2019-10-28 13:09:30 +0100
  • b23e9d5a9f
    Merge pull request #77 from phue/igenomesIgnore_deprecated Harshil Patel 2019-10-28 11:05:48 +0000
  • 18ed48f398 deprecate igenomesIgnore in favor of igenomes_ignore phue 2019-10-28 11:38:24 +0100
  • 8e5cc7838c
    Merge pull request #76 from phue/cbe_dynamic Patrick Hüther 2019-10-28 11:23:23 +0100
  • 123f199b68 cbe: dynamic qos logic phue 2019-10-27 20:44:08 +0100
  • 5ec19e3abb
    Binac SMP / Long / Short Queue Additions Alexander Peltzer 2019-10-27 13:28:00 +0100
  • b5b2dd817f
    Merge all Alexander Peltzer 2019-10-27 13:24:45 +0100
  • 28cd84d44a
    Merge pull request #74 from maxibor/master James A. Fellows Yates 2019-10-25 20:17:47 +0200
  • 834601f05b Merge branch 'master' of https://github.com/nf-core/configs Maxime Borry 2019-10-25 15:52:23 +0200
  • 7a2fe44b43 resource based queuing Maxime Borry 2019-10-25 15:50:49 +0200
  • 5e54912ada add queue choice maxibor 2019-10-25 14:08:02 +0200
  • 2b99228ce8
    Merge pull request #73 from abretaud/genouest Alexander Peltzer 2019-10-17 13:18:04 +0200
  • 883a761651 add link Anthony Bretaudeau 2019-10-16 18:45:26 +0200
  • 1f2786c78f add genouest cluster Anthony Bretaudeau 2019-10-16 18:15:04 +0200
  • b9e4ba71d0
    Merge pull request #72 from phue/cbe-singularity Patrick Hüther 2019-10-10 21:27:21 +0200
  • 9b3fda36f6 update singularity version phue 2019-10-10 21:22:19 +0200