mirror of
https://github.com/MillironX/nf-configs.git
synced 2024-12-23 02:48:17 +00:00
34 lines
1 KiB
Text
34 lines
1 KiB
Text
//Profile config names for nf-core/configs
|
|
params {
|
|
config_profile_description = 'Section for Hologenomics @ Globe Institute, University of Copenhagen - holo_globe profile provided by nf-core/configs.'
|
|
config_profile_contact = 'Aashild Vaagene (@ashildv)'
|
|
config_profile_url = 'https://globe.ku.dk/research/evogenomics/'
|
|
max_memory = 500.GB
|
|
max_cpus = 50
|
|
max_time = 720.h
|
|
}
|
|
|
|
singularity {
|
|
enabled = true
|
|
autoMounts = true
|
|
cacheDir = '/maps/projects/mjolnir1/data/cache/nf-eager/singularity'
|
|
}
|
|
|
|
env {
|
|
NXF_SINGULARITY_TMPDIR='/maps/projects/mjolnir1/people/$USER/eager_tmp/'
|
|
SINGULARITY_TMPDIR='/maps/projects/mjolnir1/people/$USER/eager_tmp/'
|
|
NXF_OPTS='-Djava.io.tmpdir=/maps/projects/mjolnir1/people/$USER/eager_tmp/ -Xms1g -Xmx4g'
|
|
TMPDIR='/maps/projects/mjolnir1/people/$USER/eager_tmp/'
|
|
NXF_TEMP='/maps/projects/mjolnir1/people/$USER/eager_tmp/'
|
|
SINGULARITY_LOCALCACHEDIR='/maps/projects/mjolnir1/people/$USER/eager_tmp/'
|
|
}
|
|
|
|
process {
|
|
executor = 'slurm'
|
|
}
|
|
|
|
cleanup = true
|
|
|
|
executor {
|
|
queueSize = 8
|
|
}
|