nf-configs/conf/holo_globe

//Profile config names for nf-core/configs
params {
  config_profile_description = 'Section for Hologenomics @ Globe Institute, University of Copenhagen - holo_globe profile provided by nf-core/configs.'
  config_profile_contact = 'Aashild Vaagene (@ashildv)'
  config_profile_url = 'https://globe.ku.dk/research/evogenomics/'
  max_memory = 500.GB
  max_cpus = 50
  max_time = 720.h
}

singularity {
        enabled = true
        autoMounts = true
        cacheDir = '/maps/projects/mjolnir1/data/cache/nf-eager/singularity'
}

env {
 NXF_SINGULARITY_TMPDIR='/maps/projects/mjolnir1/people/$USER/eager_tmp/'
 SINGULARITY_TMPDIR='/maps/projects/mjolnir1/people/$USER/eager_tmp/'
 NXF_OPTS='-Djava.io.tmpdir=/maps/projects/mjolnir1/people/$USER/eager_tmp/ -Xms1g -Xmx4g'
 TMPDIR='/maps/projects/mjolnir1/people/$USER/eager_tmp/'
 NXF_TEMP='/maps/projects/mjolnir1/people/$USER/eager_tmp/'
 SINGULARITY_LOCALCACHEDIR='/maps/projects/mjolnir1/people/$USER/eager_tmp/'
}
        
process {
 executor = 'slurm'
}
        
cleanup = true
       
executor {
  queueSize = 8
}