2022-05-11 13:32:56 +02:00
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- name: bowtie2 align test_bowtie2_align_single_end
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2022-05-11 13:55:45 +02:00
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command: nextflow run ./tests/modules/bowtie2/align -entry test_bowtie2_align_single_end -c ./tests/config/nextflow.config -c ./tests/modules/bowtie2/align/nextflow.config
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2021-02-03 16:02:58 +00:00
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tags:
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- bowtie2
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2022-05-03 11:46:19 +01:00
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- bowtie2/align
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files:
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2022-05-12 10:01:33 +01:00
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- path: ./output/bowtie2/test.bam
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2022-05-13 12:01:16 +01:00
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- path: ./output/bowtie2/test.bowtie2.log
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- path: ./output/bowtie2/versions.yml
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2022-05-12 10:01:33 +01:00
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2022-05-13 15:32:14 +02:00
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- name: bowtie2 align test_bowtie2_align_single_end_sorted
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2022-05-13 15:26:41 +02:00
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command: nextflow run ./tests/modules/bowtie2/align -entry test_bowtie2_align_single_end_sorted -c ./tests/config/nextflow.config -c ./tests/modules/bowtie2/align/nextflow.config
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tags:
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- bowtie2
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- bowtie2/align
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files:
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- path: ./output/bowtie2/test.bam
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- path: ./output/bowtie2/test.bowtie2.log
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- path: ./output/bowtie2/versions.yml
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2022-05-13 12:01:16 +01:00
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- name: bowtie2 align test_bowtie2_align_paired_end
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command: nextflow run tests/modules/bowtie2/align -entry test_bowtie2_align_paired_end -c tests/config/nextflow.config -c tests/modules/bowtie2/align/nextflow.config
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tags:
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- bowtie2
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- bowtie2/align
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files:
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- path: ./output/bowtie2/test.bam
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- path: ./output/bowtie2/test.bowtie2.log
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- path: ./output/bowtie2/versions.yml
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2022-05-12 10:01:33 +01:00
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2022-05-13 12:01:16 +01:00
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- name: bowtie2 align test_bowtie2_align_single_end_large_index
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command: nextflow run tests/modules/bowtie2/align -entry test_bowtie2_align_single_end_large_index -c tests/config/nextflow.config -c tests/modules/bowtie2/align/nextflow.config --force_large_index
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tags:
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|
- bowtie2
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|
- bowtie2/align
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|
files:
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- path: ./output/bowtie2/test.bam
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- path: ./output/bowtie2/test.bowtie2.log
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- path: ./output/bowtie2/versions.yml
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2022-05-12 10:01:33 +01:00
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2022-05-13 12:01:16 +01:00
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- name: bowtie2 align test_bowtie2_align_paired_end_large_index
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command: nextflow run tests/modules/bowtie2/align -entry test_bowtie2_align_paired_end_large_index -c tests/config/nextflow.config -c tests/modules/bowtie2/align/nextflow.config --force_large_index
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tags:
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|
- bowtie2
|
|
|
|
|
- bowtie2/align
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|
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|
|
files:
|
|
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|
- path: ./output/bowtie2/test.bam
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- path: ./output/bowtie2/test.bowtie2.log
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- path: ./output/bowtie2/versions.yml
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