nf-core_modules/tests/modules/merquryfk/katgc/main.nf

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#!/usr/bin/env nextflow
nextflow.enable.dsl = 2
include { FASTK_FASTK } from '../../../../modules/fastk/fastk/main.nf'
include { MERQURYFK_KATGC } from '../../../../modules/merquryfk/katgc/main.nf'
workflow test_merquryfk_katgc_png {
input = [
[ id:'test', single_end:true ], // meta map
file(params.test_data['homo_sapiens']['illumina']['test_1_fastq_gz'], checkIfExists: true)
]
FASTK_FASTK ( input )
MERQURYFK_KATGC ( FASTK_FASTK.out.hist
.join( FASTK_FASTK.out.ktab )
)
}
workflow test_merquryfk_katgc_pdf {
input = [
[ id:'test', single_end:true ], // meta map
file(params.test_data['homo_sapiens']['illumina']['test_1_fastq_gz'], checkIfExists: true)
]
FASTK_FASTK ( input )
MERQURYFK_KATGC ( FASTK_FASTK.out.hist
.join( FASTK_FASTK.out.ktab )
)
}