mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-09-21 07:42:05 +00:00
32 lines
854 B
Text
32 lines
854 B
Text
#!/usr/bin/env nextflow
|
|
|
|
nextflow.enable.dsl = 2
|
|
|
|
include { FASTK_FASTK } from '../../../../modules/fastk/fastk/main.nf'
|
|
include { MERQURYFK_KATGC } from '../../../../modules/merquryfk/katgc/main.nf'
|
|
|
|
workflow test_merquryfk_katgc_png {
|
|
|
|
input = [
|
|
[ id:'test', single_end:true ], // meta map
|
|
file(params.test_data['homo_sapiens']['illumina']['test_1_fastq_gz'], checkIfExists: true)
|
|
]
|
|
|
|
FASTK_FASTK ( input )
|
|
MERQURYFK_KATGC ( FASTK_FASTK.out.hist
|
|
.join( FASTK_FASTK.out.ktab )
|
|
)
|
|
}
|
|
|
|
workflow test_merquryfk_katgc_pdf {
|
|
|
|
input = [
|
|
[ id:'test', single_end:true ], // meta map
|
|
file(params.test_data['homo_sapiens']['illumina']['test_1_fastq_gz'], checkIfExists: true)
|
|
]
|
|
|
|
FASTK_FASTK ( input )
|
|
MERQURYFK_KATGC ( FASTK_FASTK.out.hist
|
|
.join( FASTK_FASTK.out.ktab )
|
|
)
|
|
}
|