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fix tests (again)

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This commit is contained in:
Matthias De Smet 2022-05-22 06:54:09 +02:00
parent cbceee9621
commit e13fbf423e
2 changed files with 0 additions and 11 deletions
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10
tests/modules/picard/collectmultiplemetrics/test.yml
View file

@ -5,25 +5,15 @@
- picard/collectmultiplemetrics
files:
- path: output/picard/test.CollectMultipleMetrics.alignment_summary_metrics
contains: '[ # TODO nf-core: file md5sum was variable, please replace this text with a string found in the file instead ]'
- path: output/picard/test.CollectMultipleMetrics.base_distribution_by_cycle.pdf
contains: '[ # TODO nf-core: file md5sum was variable, please replace this text with a string found in the file instead ]'
- path: output/picard/test.CollectMultipleMetrics.base_distribution_by_cycle_metrics
contains: '[ # TODO nf-core: file md5sum was variable, please replace this text with a string found in the file instead ]'
- path: output/picard/test.CollectMultipleMetrics.insert_size_histogram.pdf
contains: '[ # TODO nf-core: file md5sum was variable, please replace this text with a string found in the file instead ]'
- path: output/picard/test.CollectMultipleMetrics.insert_size_metrics
contains: '[ # TODO nf-core: file md5sum was variable, please replace this text with a string found in the file instead ]'
- path: output/picard/test.CollectMultipleMetrics.quality_by_cycle.pdf
contains: '[ # TODO nf-core: file md5sum was variable, please replace this text with a string found in the file instead ]'
- path: output/picard/test.CollectMultipleMetrics.quality_by_cycle_metrics
contains: '[ # TODO nf-core: file md5sum was variable, please replace this text with a string found in the file instead ]'
- path: output/picard/test.CollectMultipleMetrics.quality_distribution.pdf
contains: '[ # TODO nf-core: file md5sum was variable, please replace this text with a string found in the file instead ]'
- path: output/picard/test.CollectMultipleMetrics.quality_distribution_metrics
contains: '[ # TODO nf-core: file md5sum was variable, please replace this text with a string found in the file instead ]'
- path: output/picard/test.CollectMultipleMetrics.read_length_histogram.pdf
contains: '[ # TODO nf-core: file md5sum was variable, please replace this text with a string found in the file instead ]'
- name: picard collectmultiplemetrics test_picard_collectmultiplemetrics_nofasta
command: nextflow run ./tests/modules/picard/collectmultiplemetrics -entry test_picard_collectmultiplemetrics_nofasta -c ./tests/config/nextflow.config -c ./tests/modules/picard/collectmultiplemetrics/nextflow.config

1
tests/modules/picard/collectwgsmetrics/test.yml
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@ -5,4 +5,3 @@
- picard
files:
- path: output/picard/test.CollectWgsMetrics.coverage_metrics
contains: '[ # TODO nf-core: file md5sum was variable, please replace this text with a string found in the file instead ]'