add ci test

This commit is contained in:
Piotr Faba 2020-03-06 14:31:44 +00:00
parent c90474202c
commit f33dd2d2e9

22
.github/workflows/cutadapt.yml vendored Normal file
View file

@ -0,0 +1,22 @@
name: cutadapt
on:
push: {}
pull_request:
paths: tools/cutadapt/*
jobs:
run_ci_test:
runs-on: ubuntu-latest
steps:
# Check out the repository
- uses: actions/checkout@v1
submodules: true
- name: Install Nextflow
run: |
wget -qO- get.nextflow.io | bash
sudo mv nextflow /usr/local/bin/
# Test the module
- run: nextflow run ./tools/cutadapt/sort/test_paired/ -ansi-log false