review-correction | Variable name change

Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
This commit is contained in:
Chris Cheshire 2020-06-23 09:34:57 +01:00 committed by GitHub
parent cdd50fdf7d
commit fc8bc4675d
No known key found for this signature in database
GPG key ID: 4AEE18F83AFDEB23

View file

@ -33,7 +33,7 @@ process umitools_dedup {
}
// Contruct CL line
internal_cl = "${internal_prog} ${internal_args} -I $bam -S ${sample_id}.dedup.bam --output-stats=${sample_id}"
command = "${internal_prog} ${internal_args} -I $bam -S ${sample_id}.dedup.bam --output-stats=${sample_id}"
// Log
if (params.verbose){