drpatelh
|
16d3ad5d06
|
Adapt script for meta
|
2020-08-07 00:35:34 +01:00 |
|
drpatelh
|
f315a7b3c4
|
Hard copy files
|
2020-08-05 18:38:27 +01:00 |
|
drpatelh
|
5d224740cd
|
Change path
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2020-08-05 17:17:58 +01:00 |
|
drpatelh
|
7f5ca56413
|
Soft-link functions to top-level module dir
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2020-08-05 17:03:04 +01:00 |
|
drpatelh
|
3ec4f63fd8
|
Use correct link to fastqc
|
2020-08-05 16:28:42 +01:00 |
|
drpatelh
|
c08e6959a5
|
Reorganise everything
|
2020-08-05 16:09:25 +01:00 |
|
Phil Ewels
|
3406ed4da0
|
Merge branch 'master' into fastqc-unit-test
|
2020-07-17 16:00:59 +02:00 |
|
Phil Ewels
|
f01b3f13a6
|
Remove debugging statement
|
2020-07-17 16:00:08 +02:00 |
|
Phil Ewels
|
2d1252c804
|
FastQC tests - disable hash check
|
2020-07-17 11:30:28 +02:00 |
|
Phil Ewels
|
dcc4beacb1
|
Fix FastQC test
|
2020-07-17 11:26:50 +02:00 |
|
Stephen Kelly
|
846a862513
|
move md5 function to lib dir and symlink to fastqc test dir, rename md5 function
|
2020-07-16 09:17:48 -04:00 |
|
Phil Ewels
|
9dfafb4a19
|
Merge pull request #46 from stevekm/fastqc-unit-test
add FastQC output validation and md5 checksum hash checks
|
2020-07-16 15:13:44 +02:00 |
|
Stephen Kelly
|
45fbbb538c
|
add FastQC output validation and md5 checksum hash checks
|
2020-07-16 08:20:37 -04:00 |
|
FelixKrueger
|
e90164dd0b
|
Adding back tool specific input output and index files
|
2020-07-15 15:46:45 +01:00 |
|
drpatelh
|
532859d437
|
Update path
|
2020-07-15 14:07:19 +01:00 |
|
Gregor Sturm
|
a2bcb5c36a
|
Update module according to discussion on Slack
|
2020-07-15 13:04:49 +02:00 |
|
Gregor Sturm
|
01a926866e
|
Update software/fastqc/test/main.nf
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
|
2020-07-15 12:48:21 +02:00 |
|
Gregor Sturm
|
9d7cece077
|
Update software/fastqc/meta.yml
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
|
2020-07-15 12:48:11 +02:00 |
|
Gregor Sturm
|
5a8803ee2f
|
Update software/fastqc/meta.yml
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
|
2020-07-15 12:48:03 +02:00 |
|
Gregor Sturm
|
a3db769a93
|
Update software/fastqc/meta.yml
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
|
2020-07-15 12:47:52 +02:00 |
|
Gregor Sturm
|
180310bf0a
|
Update software/fastqc/meta.yml
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
|
2020-07-15 12:47:42 +02:00 |
|
Gregor Sturm
|
6ad2b570c2
|
Update software/fastqc/meta.yml
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
|
2020-07-15 12:47:30 +02:00 |
|
Gregor Sturm
|
53897f4d97
|
Update software/fastqc/meta.yml
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
|
2020-07-15 12:47:19 +02:00 |
|
Gregor Sturm
|
b00bb83532
|
Document params
|
2020-07-15 11:01:15 +02:00 |
|
Gregor Sturm
|
86d6daf9de
|
Implement publish_results parameter
|
2020-07-15 10:55:52 +02:00 |
|
Gregor Sturm
|
1dc47e7cd3
|
Make publishDir more flexible
|
2020-07-15 10:16:48 +02:00 |
|
Gregor Sturm
|
dd34fa5853
|
Use moduleDir for conda env
|
2020-07-15 09:48:17 +02:00 |
|
Gregor Sturm
|
f7c42ac4fd
|
Add tests for fastqc module
|
2020-07-15 09:48:14 +02:00 |
|
Gregor Sturm
|
167067a92e
|
Clean up module file
|
2020-07-15 09:47:41 +02:00 |
|
Phil Ewels
|
d3f3432451
|
Update test file imports
|
2020-07-11 14:33:12 +02:00 |
|
Phil Ewels
|
014fef2e92
|
Rename tools to software
|
2020-07-11 14:27:21 +02:00 |
|