Ramprasad Neethiraj
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e639b1e455
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Merge branch 'master' into feat/update_cnvpytor
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2022-05-06 12:03:12 +02:00 |
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Ramprasad Neethiraj
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77209d0866
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Merge pull request #1618 from ramprasadn/feat/update_svdb
update svdb version
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2022-05-06 11:48:22 +02:00 |
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Ramprasad Neethiraj
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1ccea5ff4d
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remove prefix def in callcnvs
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2022-05-06 10:56:58 +02:00 |
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Ramprasad Neethiraj
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313d76e005
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update svdb version
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2022-05-06 00:18:16 +02:00 |
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Ramprasad Neethiraj
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bb5c904e59
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Merge branch 'feat/update_cnvpytor' of github.com:ramprasadn/modules into feat/update_cnvpytor
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2022-05-06 00:13:57 +02:00 |
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Ramprasad Neethiraj
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af73544010
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update meta
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2022-05-06 00:13:49 +02:00 |
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Ramprasad Neethiraj
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db56d80060
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Merge branch 'master' of https://github.com/nf-core/modules into feat/update_cnvpytor
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2022-05-06 00:10:28 +02:00 |
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Ramprasad Neethiraj
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1a3f18d012
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Merge branch 'master' into feat/update_cnvpytor
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2022-05-06 00:10:05 +02:00 |
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Ramprasad Neethiraj
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e4e4f8090c
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combine multiple pytor
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2022-05-05 23:59:12 +02:00 |
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Ramprasad Neethiraj
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4dff258262
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Merge pull request #1594 from ramprasadn/feat/update_cnvpytor
update cnvpytor to v1.2.1
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2022-05-05 17:32:00 +02:00 |
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Ramprasad Neethiraj
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db2acba71b
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Merge branch 'master' into feat/update_cnvpytor
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2022-05-05 17:31:10 +02:00 |
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Ramprasad Neethiraj
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c183d7b397
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Merge branch 'feat/update_cnvpytor' of github.com:ramprasadn/modules into feat/update_cnvpytor
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2022-05-05 17:28:59 +02:00 |
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Ramprasad Neethiraj
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ea1f5daf44
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polish python script in view
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2022-05-05 17:28:49 +02:00 |
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JIANHONG OU
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1be14375ce
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Merge pull request #1528 from jianhong/motus_downloaddb
add module motus_downloaddb
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2022-05-05 09:37:02 -04:00 |
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JIANHONG OU
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a8bc386ea3
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Merge branch 'master' into motus_downloaddb
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2022-05-05 09:36:25 -04:00 |
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Simone Carpanzano
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e4a31e4e0e
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Merge pull request #1601 from carpanz/firstbranch
Non-breaking changes to krona modules: update kronadb module name, inclusion of ext.args, legacy module maintained
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2022-05-05 14:32:54 +02:00 |
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JIANHONG OU
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566c11dacc
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Merge branch 'master' into motus_downloaddb
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2022-05-05 08:28:10 -04:00 |
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Francesco L
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97f318eea6
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Merge branch 'master' into firstbranch
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2022-05-05 14:25:00 +02:00 |
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Maxime U. Garcia
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448934b749
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Merge pull request #1613 from maxulysse/master_snpeff_vep_improved
update ensemblvep and snpeff modules
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2022-05-05 14:24:47 +02:00 |
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Carpanzano
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a700a9c15e
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Merge branch 'firstbranch' of github.com:carpanz/modules into firstbranch
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2022-05-05 13:52:45 +02:00 |
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Carpanzano
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9083d3bb3d
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integrating suggestions from PR comments, including recovery of tests for kronadb and more detailed explanation of input database in yml file
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2022-05-05 13:51:41 +02:00 |
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MaxUlysse
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40dd662fd2
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update ensemblvep and snpeff modules
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2022-05-05 12:57:14 +02:00 |
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James A. Fellows Yates
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e60c6f9bfd
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Merge branch 'master' into firstbranch
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2022-05-05 10:57:27 +02:00 |
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Carpanzano
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204dfba2d8
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fixing ktupdatetaxonomy/meta.yml as suggested in PR
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2022-05-05 10:51:22 +02:00 |
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Lauri Mesilaakso
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6bb9be38c5
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Merge pull request #1606 from Genomic-Medicine-Linkoping/add_compression_to_bam2fq
update samtools/bam2fq: add compression for output fastq file
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2022-05-05 09:37:36 +03:00 |
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ljmesi
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888e122f05
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Merge branch 'add_compression_to_bam2fq' of https://github.com/Genomic-Medicine-Linkoping/modules into add_compression_to_bam2fq
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2022-05-05 08:32:48 +02:00 |
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ljmesi
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be8ce6de2a
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Remove variable md5sum from the tests
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2022-05-05 08:32:45 +02:00 |
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James A. Fellows Yates
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6393a085c5
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Apply suggestions from code review
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2022-05-05 08:23:51 +02:00 |
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JIANHONG OU
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29ee72c693
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update meta.yml and remove the cleanup step.
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2022-05-04 15:37:12 -04:00 |
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JIANHONG OU
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e9c82a5f48
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Update modules/motus/downloaddb/meta.yml
Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
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2022-05-04 15:29:06 -04:00 |
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James A. Fellows Yates
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35b5ba673f
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Merge branch 'master' into motus_downloaddb
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2022-05-04 20:58:08 +02:00 |
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James A. Fellows Yates
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ec5bada3fc
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Update modules/motus/downloaddb/meta.yml
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2022-05-04 20:55:16 +02:00 |
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Lauri Mesilaakso
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e757966566
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Merge branch 'master' into add_compression_to_bam2fq
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2022-05-04 18:41:36 +03:00 |
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Carpanzano
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a6086f549d
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recovered process name
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2022-05-04 17:28:24 +02:00 |
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Carpanzano
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38faf040ec
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missing change in ext.args config
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2022-05-04 16:54:15 +02:00 |
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Carpanzano
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e7b92a7616
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fixing md5sum changes
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2022-05-04 16:43:22 +02:00 |
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Carpanzano
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8b1711d8a1
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recovering old module name
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2022-05-04 16:38:10 +02:00 |
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Simone Carpanzano
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162f8edf54
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Merge branch 'master' into firstbranch
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2022-05-04 16:35:25 +02:00 |
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Carpanzano
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6b8ca501ed
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fixing suggestions from PR
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2022-05-04 16:34:52 +02:00 |
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nvnieuwk
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486cc1d142
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Merge pull request #1611 from nvnieuwk/split-hap.py-into-two-modules
Split hap.py into two parts
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2022-05-04 15:49:31 +02:00 |
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Nicolas Vannieuwkerke
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42bdc5471e
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Changed the pytest location of happy
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2022-05-04 15:40:34 +02:00 |
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Nicolas Vannieuwkerke
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f875aec46b
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Split the module into two parts
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2022-05-04 15:29:48 +02:00 |
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nvnieuwk
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994cd6d171
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Merge pull request #1610 from nvnieuwk/new-module-hap.py
New module hap.py
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2022-05-04 15:00:45 +02:00 |
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Nicolas Vannieuwkerke
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3c66138672
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Linting issue + removed the contains lines
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2022-05-04 14:49:17 +02:00 |
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Nicolas Vannieuwkerke
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5889d6c923
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Another possible fix for the pytest issues
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2022-05-04 14:46:15 +02:00 |
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Nicolas Vannieuwkerke
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583ea13800
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Another try to fix the pytest issues
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2022-05-04 14:22:55 +02:00 |
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Nicolas Vannieuwkerke
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17dbd2bb82
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Linting issue fixed
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2022-05-04 14:18:56 +02:00 |
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Nicolas Vannieuwkerke
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505ab03803
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fixed a description
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2022-05-04 14:14:53 +02:00 |
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Nicolas Vannieuwkerke
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c1393bf999
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Possible fix for the pytest errors?
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2022-05-04 14:14:01 +02:00 |
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Nicolas Vannieuwkerke
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177a7e49f2
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Fixed a linting issue
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2022-05-04 14:06:42 +02:00 |
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