Matthias De Smet ee46c19d03 new module: Picard/fastqtosam (#1911) ... * add Picard FastqToSam * Update test.yml * update tests * possible fix? * fixed! * Update modules/picard/fastqtosam/main.nf Co-authored-by: Moritz E. Beber <midnighter@posteo.net> * Update modules/picard/fastqtosam/main.nf Co-authored-by: Moritz E. Beber <midnighter@posteo.net> * simplify tests * fix tests * revert version check Co-authored-by: CMGG ICT Team <ict@cmgg.be> Co-authored-by: Moritz E. Beber <midnighter@posteo.net>		2022-08-30 14:27:00 +02:00
..
addorreplacereadgroups	drop md5sum from versions.yml	2022-04-29 08:19:42 +02:00
cleansam	drop md5sum from versions.yml	2022-04-29 08:19:42 +02:00
collecthsmetrics	fix tests	2022-05-22 06:51:27 +02:00
collectmultiplemetrics	Bump tool versions for modules required in viralrecon (#1859)	2022-07-07 14:48:04 +01:00
collectwgsmetrics	add stub for picard/collectwgsmtrics (#1945)	2022-08-09 09:33:15 +02:00
createsequencedictionary	drop md5sum from versions.yml	2022-04-29 08:19:42 +02:00
crosscheckfingerprints	Tool/crosscheckfingerprints (#1505)	2022-04-08 10:02:10 -04:00
fastqtosam	new module: Picard/fastqtosam (#1911)	2022-08-30 14:27:00 +02:00
filtersamreads	Fix formatting in yaml files, add yamllint config (#1279)	2022-02-15 11:15:27 +00:00
fixmateinformation	remove version md5sum from fixmateinformation	2022-04-29 10:12:52 +02:00
liftovervcf	fix args in nextflow.config	2022-04-29 10:21:22 +02:00
markduplicates	fix args in nextflow.config	2022-04-29 10:13:39 +02:00
mergesamfiles	Update all modules to new NF DSL2 syntax (#1099)	2021-11-26 07:58:40 +00:00
sortsam	Change syntax from task.ext.suffix to tast.ext.prefix in all modules (#1110)	2021-12-02 12:39:55 +00:00
sortvcf	Add picard/sortvcf (#1370)	2022-03-03 11:40:16 -05:00