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31166227d3
* Separate MultiQC config from logo input channel * Update meta.yml * Update main.nf * Add test for new check * md5sum -> contains
41 lines
1.8 KiB
YAML
41 lines
1.8 KiB
YAML
- name: multiqc test_multiqc
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command: nextflow run ./tests/modules/multiqc -entry test_multiqc -c ./tests/config/nextflow.config -c ./tests/modules/multiqc/nextflow.config
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tags:
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- multiqc
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files:
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- path: output/multiqc/multiqc_data/multiqc.log
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contains: ["MultiQC complete"]
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- path: output/multiqc/multiqc_data/multiqc_citations.txt
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contains: ["10.1093/bioinformatics/btw354"]
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- path: output/multiqc/multiqc_data/multiqc_data.json
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contains: ["report_data_sources"]
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- path: output/multiqc/multiqc_report.html
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contains: ["Abandon hope all ye who enter here.."]
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- name: multiqc test_multiqc_fn_collision
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command: nextflow run ./tests/modules/multiqc -entry test_multiqc_fn_collision -c ./tests/config/nextflow.config -c ./tests/modules/multiqc/nextflow.config
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tags:
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- multiqc
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files:
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- path: output/multiqc/multiqc_data/multiqc.log
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contains: ["MultiQC complete"]
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- path: output/multiqc/multiqc_data/multiqc_citations.txt
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contains: ["10.1093/bioinformatics/btw354"]
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- path: output/multiqc/multiqc_data/multiqc_data.json
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contains: ["report_data_sources"]
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- path: output/multiqc/multiqc_report.html
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contains: ["Abandon hope all ye who enter here.."]
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- name: multiqc test_multiqc_config
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command: nextflow run ./tests/modules/multiqc -entry test_multiqc_config -c ./tests/config/nextflow.config -c ./tests/modules/multiqc/nextflow.config
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tags:
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- multiqc
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files:
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- path: output/multiqc/multiqc_data/multiqc.log
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contains: ["MultiQC complete"]
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- path: output/multiqc/multiqc_data/multiqc_citations.txt
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contains: ["10.1093/bioinformatics/btw354"]
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- path: output/multiqc/multiqc_data/multiqc_data.json
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contains: ["report_data_sources"]
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- path: output/multiqc/multiqc_report.html
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contains: ["Abandon hope all ye who enter here.."]
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