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45 lines
1.2 KiB
YAML
45 lines
1.2 KiB
YAML
name: fastani
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description: Alignment-free computation of average nucleotide Identity (ANI)
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keywords:
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- genome
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- fasta
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- ANI
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tools:
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- fastani:
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description: FastANI is developed for fast alignment-free computation of whole-genome Average Nucleotide Identity (ANI).
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homepage: https://github.com/ParBLiSS/FastANI
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documentation: https://github.com/ParBLiSS/FastANI
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tool_dev_url: https://github.com/ParBLiSS/FastANI
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doi: 10.1038/s41467-018-07641-9
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licence: ["Apache-2.0"]
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input:
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- meta:
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type: map
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description: |
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Groovy Map containing sample information
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e.g. [ id:'test', single_end:false ]
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- query:
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type: file
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description: Fasta file(s) to be queried
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pattern: "*.fasta"
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- reference:
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type: file
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description: Fasta file(s) to be used as reference for the query
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pattern: "*.fasta"
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output:
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- meta:
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type: map
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description: |
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Groovy Map containing sample information
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e.g. [ id:'test', single_end:false ]
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- ani:
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type: file
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description: Results of the query
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pattern: "*.ani.txt"
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- versions:
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type: file
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description: File containing software versions
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pattern: "versions.yml"
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authors:
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- "@abhi18av"
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