nf-core_modules/tests/modules/biobambam/bammerge/nextflow.config
Matthias De Smet 743e95c61b fix config
2022-05-17 09:01:02 +02:00

13 lines
345 B
Text

process {
publishDir = { "${params.outdir}/${task.process.tokenize(':')[-1].tokenize('_')[0].toLowerCase()}" }
withName: BIOBAMBAM_BAMMERGE {
ext.args = [
"md5=1",
{"md5filename=${meta.id}.md5"},
"index=1",
{"indexfilename=${meta.id}.bam.bai"}
].join(" ").trim()
}
}