nf-core_modules/tests/modules/samtools/flagstat/test.yml at c5235a983d454787fa0c3247b02086969217163b - millironx/nf-core_modules - Milliron X Code: Code hosting for cattle or technology, but especially anything to do with both of them

millironx/nf-core_modules

mirror of https://github.com/MillironX/nf-core_modules.git synced 2024-09-21 15:52:05 +00:00

Harshil Patel c5235a983d

nf-core modules bump-versions for all modules (#630 )

* Add blacklist of modules that shouldn't be updated to .nf-core.yml

* nf-core modules bump-versions for all modules

* Remove TODO statements identified by linting

* Fix md5sums for failing tests

* Fix more tests

2021-07-28 09:10:44 +01:00

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 - name: samtools flagstat
   command: nextflow run ./tests/modules/samtools/flagstat -entry test_samtools_flagstat -c tests/config/nextflow.config
   tags:
     - samtools
     - samtools/flagstat
   files:
     - path: ./output/samtools/test.paired_end.sorted.bam.flagstat
       md5sum: 4f7ffd1e6a5e85524d443209ac97d783