nf-core_modules/software
Anders Goncalves da Silva e9aa037e7b
Add function to enable output of mpileup
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
2021-02-10 10:02:06 -08:00
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bandage/image Address review comments 2021-02-04 12:10:54 -06:00
bcftools Adressing general comments on PR #134 2021-02-08 15:11:36 +01:00
bedtools Merge pull request #151 from drpatelh/bedtools 2021-02-09 01:54:31 +00:00
blast Adding blast blastn module 2021-02-09 16:58:36 +01:00
bowtie Rename bowtie_index to bowtie_build 2021-02-01 17:53:31 +00:00
bowtie2 Update software/bowtie2/build/meta.yml 2021-01-30 13:21:56 +00:00
bwa bwa - add build info for mulled container 2021-02-03 11:04:25 +00:00
cutadapt cutadapt - add build to conda definition 2021-02-03 09:16:33 +00:00
deeptools deeptools - add build to conda definition 2021-02-03 09:16:59 +00:00
dsh various - add build to conda definition 2021-02-03 09:19:46 +00:00
fastp added fastp module 2021-02-01 13:54:08 +01:00
fastqc various - add build to conda definition 2021-02-03 09:19:46 +00:00
gffread various - add build to conda definition 2021-02-03 09:19:46 +00:00
gunzip Remove meta from input/output meta.yml 2021-02-09 11:02:31 +01:00
hisat2 hisat2 - add build info for mulled container 2021-02-03 11:04:35 +00:00
homer/annotatepeaks various - add build to conda definition 2021-02-03 09:19:46 +00:00
ivar/consensus Add function to enable output of mpileup 2021-02-10 10:02:06 -08:00
lib style(#77): Fix editorconfig errors 2020-12-17 17:50:24 -06:00
macs2/callpeak various - add build to conda definition 2021-02-03 09:19:46 +00:00
minimap2/align Fix CI test failure 2021-02-05 11:41:36 -06:00
multiqc various - add build to conda definition 2021-02-03 09:19:46 +00:00
pangolin various - add build to conda definition 2021-02-03 09:19:46 +00:00
phantompeakqualtools various - add build to conda definition 2021-02-03 09:19:46 +00:00
picard picard - add build to conda definition 2021-02-03 09:18:37 +00:00
preseq/lcextrap various - add build to conda definition 2021-02-03 09:19:46 +00:00
qualimap/rnaseq various - add build to conda definition 2021-02-03 09:20:34 +00:00
quast Update software/quast/meta.yml 2021-02-01 14:03:36 +01:00
rsem rsem - add build info for mulled container 2021-02-03 11:04:59 +00:00
rseqc rseqc - add build to conda definition 2021-02-03 09:18:20 +00:00
salmon various - add build to conda definition 2021-02-03 09:20:34 +00:00
samtools samtools - add build to conda definition 2021-02-03 09:17:38 +00:00
seacr/callpeak seacr - add build info for mulled container 2021-02-03 11:05:10 +00:00
sortmerna various - add build to conda definition 2021-02-03 09:20:34 +00:00
star various - add build to conda definition 2021-02-03 09:20:34 +00:00
stringtie various - add build to conda definition 2021-02-03 09:20:34 +00:00
subread/featurecounts various - add build to conda definition 2021-02-03 09:20:34 +00:00
TOOL/SUBTOOL Fix barfing linters 2021-02-08 00:57:06 +00:00
trimgalore various - add build to conda definition 2021-02-03 09:20:34 +00:00
ucsc/bedgraphtobigwig various - add build to conda definition 2021-02-03 09:20:34 +00:00
umitools various - add build to conda definition 2021-02-03 09:20:34 +00:00
untar Add untar module 2021-02-09 11:50:32 +01:00