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19 lines
1.1 KiB
Markdown
19 lines
1.1 KiB
Markdown
# VarScan
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[](https://github.com/MillironX/singularity-builds/tree/master/varscan)
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[](https://github.com/dkoboldt/varscan)
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[](https://cloud.sylabs.io/library/millironx/default/varscan)
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[](https://dkoboldt.github.io/varscan/)
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[](https://www.alpinelinux.org/)
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VarScan is a platform-independent mutation caller for targeted, exome, and whole-genome resequencing data generated on Illumina, SOLiD, Life/PGM, Roche/454, and similar instruments.
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## Tools installed
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### samtools
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- `samtools`
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### VarScan
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- `varscan`
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