2022-02-18 06:55:14 +00:00
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{
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|
"name": "nf-core/taxprofiler",
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|
"homePage": "https://github.com/nf-core/taxprofiler",
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"repos": {
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"nf-core/modules": {
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2022-03-31 13:31:45 +00:00
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"adapterremoval": {
|
2022-04-05 08:18:34 +00:00
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"git_sha": "879d42c5e28661fe0a5e744c9e2c515868f9e08a"
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2022-03-31 13:31:45 +00:00
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},
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2022-04-02 15:02:05 +00:00
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"bbmap/bbduk": {
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"git_sha": "e745e167c1020928ef20ea1397b6b4d230681b4d"
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2022-03-31 13:31:45 +00:00
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},
|
2022-04-03 05:58:40 +00:00
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"bowtie2/align": {
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"git_sha": "e745e167c1020928ef20ea1397b6b4d230681b4d"
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},
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"bowtie2/build": {
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"git_sha": "e745e167c1020928ef20ea1397b6b4d230681b4d"
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},
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2022-02-18 15:51:01 +00:00
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"cat/fastq": {
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"git_sha": "e745e167c1020928ef20ea1397b6b4d230681b4d"
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},
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2022-04-07 14:13:17 +00:00
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"centrifuge/centrifuge": {
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"git_sha": "d2726fcf75063960f06b36d2229a4c0966614108"
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},
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2022-04-22 13:24:10 +00:00
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"centrifuge/kreport": {
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"git_sha": "be4ae28c3c95b3c4047a7d9fb4cb0ed749631cea"
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},
|
2022-02-18 06:55:14 +00:00
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"custom/dumpsoftwareversions": {
|
2022-03-23 13:57:56 +00:00
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|
"git_sha": "e745e167c1020928ef20ea1397b6b4d230681b4d"
|
2022-02-18 06:55:14 +00:00
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},
|
2022-04-29 19:59:42 +00:00
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"diamond/blastx": {
|
2022-05-07 03:22:35 +00:00
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|
"git_sha": "bd3bfe0817246082525ab93707976676b1fe208b"
|
2022-04-29 19:59:42 +00:00
|
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|
},
|
2022-02-18 15:51:01 +00:00
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|
"fastp": {
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|
|
|
"git_sha": "d0a1cbb703a130c19f6796c3fce24fbe7dfce789"
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|
|
|
},
|
2022-02-18 06:55:14 +00:00
|
|
|
"fastqc": {
|
2022-03-23 13:57:56 +00:00
|
|
|
"git_sha": "e745e167c1020928ef20ea1397b6b4d230681b4d"
|
2022-02-18 06:55:14 +00:00
|
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|
},
|
2022-04-22 13:24:10 +00:00
|
|
|
"kaiju/kaiju": {
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|
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|
"git_sha": "8856f127c58f6af479128be8b8df4d42e442ddbe"
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|
|
|
},
|
2022-04-25 15:36:29 +00:00
|
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|
"kaiju/kaiju2table": {
|
|
|
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|
"git_sha": "538dbac98ba9c8f799536cd5a617195501439457"
|
|
|
|
|
},
|
2022-03-03 16:42:02 +00:00
|
|
|
"kraken2/kraken2": {
|
2022-05-07 03:22:35 +00:00
|
|
|
"git_sha": "abe025677cdd805cc93032341ab19885473c1a07"
|
2022-03-03 16:42:02 +00:00
|
|
|
},
|
|
|
|
|
"malt/run": {
|
2022-03-03 17:04:03 +00:00
|
|
|
"git_sha": "72b96f4e504eef673f2b5c13560a9d90b669129b"
|
2022-03-03 16:42:02 +00:00
|
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|
},
|
2022-04-13 09:49:35 +00:00
|
|
|
"megan/rma2info": {
|
|
|
|
|
"git_sha": "2d38566eca4cc15142b2ffa7c11837569b39aece"
|
|
|
|
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},
|
2022-03-18 14:38:19 +00:00
|
|
|
"metaphlan3": {
|
2022-05-03 07:28:46 +00:00
|
|
|
"git_sha": "ed4dd1a928ebf4308efb720de878045f7773f8e2"
|
|
|
|
|
},
|
|
|
|
|
"minimap2/align": {
|
|
|
|
|
"git_sha": "1a5a9e7b4009dcf34e6867dd1a5a1d9a718b027b"
|
|
|
|
|
},
|
|
|
|
|
"minimap2/index": {
|
2022-03-18 14:38:19 +00:00
|
|
|
"git_sha": "e745e167c1020928ef20ea1397b6b4d230681b4d"
|
|
|
|
|
},
|
2022-02-18 06:55:14 +00:00
|
|
|
"multiqc": {
|
2022-03-23 13:57:56 +00:00
|
|
|
"git_sha": "e745e167c1020928ef20ea1397b6b4d230681b4d"
|
2022-03-21 14:07:59 +00:00
|
|
|
},
|
2022-03-18 13:34:10 +00:00
|
|
|
"porechop": {
|
|
|
|
|
"git_sha": "e20e57f90b6787ac9a010a980cf6ea98bd990046"
|
2022-03-28 14:46:45 +00:00
|
|
|
},
|
2022-04-04 19:16:51 +00:00
|
|
|
"prinseqplusplus": {
|
|
|
|
|
"git_sha": "f1c5384c31e985591716afdd732cf8c2ae29d05b"
|
|
|
|
|
},
|
2022-05-03 07:28:46 +00:00
|
|
|
"samtools/bam2fq": {
|
2022-05-05 06:38:41 +00:00
|
|
|
"git_sha": "5510ea39fe638594bc26ac34cadf4a84bf27d159"
|
2022-05-03 07:28:46 +00:00
|
|
|
},
|
|
|
|
|
"samtools/view": {
|
2022-05-03 09:09:54 +00:00
|
|
|
"git_sha": "6b64f9cb6c3dd3577931cc3cd032d6fb730000ce"
|
2022-05-03 07:28:46 +00:00
|
|
|
},
|
2022-03-28 14:46:45 +00:00
|
|
|
"untar": {
|
|
|
|
|
"git_sha": "e080f4c8acf5760039ed12ec1f206170f3f9a918"
|
2022-02-18 06:55:14 +00:00
|
|
|
}
|
|
|
|
|
}
|
|
|
|
|
}
|
2022-06-02 10:51:39 +00:00
|
|
|
}
|
