millironx/taxprofiler
1
0
Fork 0
mirror of https://github.com/MillironX/taxprofiler.git synced 2024-11-25 21:19:55 +00:00
Code Issues Releases Packages Activity

Update docs/usage.md

Browse source 
Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
This commit is contained in:
Sofia Stamouli 2022-09-13 18:12:14 +02:00 committed by GitHub
parent c664508240
commit 0072c29a6f
No known key found for this signature in database
GPG key ID: 4AEE18F83AFDEB23
1 changed files with 1 additions and 1 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

2
docs/usage.md
View file

@ -413,6 +413,6 @@ NXF_OPTS='-Xms1g -Xmx4g'
## Troubleshooting and FAQs ## Troubleshooting and FAQs
### I get a warning during centrifuge_kreport process when running taxprofiler on a minimal dataset. ### I get a warning during centrifuge_kreport process with exit status 255.
When a sample has no hits, `centrifuge` classifier exits with exit code `255`. The pipeline does not fail and this is provided as a `WARN`. When a sample has no hits, `centrifuge` classifier exits with exit code `255`. The pipeline does not fail and this is provided as a `WARN`.