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@ -5,7 +5,7 @@ process KRONA_CLEANUP {
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conda "conda-forge::sed=4.7"
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conda "conda-forge::sed=4.7"
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container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
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container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
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'https://depot.galaxyproject.org/singularity/ubuntu:20.04' :
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'https://depot.galaxyproject.org/singularity/ubuntu:20.04' :
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'ubuntu:20.04' }"
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'docker.io/ubuntu:20.04' }"
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input:
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input:
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tuple val(meta), path(krona, stageAs: 'uncleaned.krona.txt')
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tuple val(meta), path(krona, stageAs: 'uncleaned.krona.txt')
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