Ciarán O'Mara
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0e0908f985
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Merge branch 'hotfix/memory'
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2020-04-12 17:35:21 +10:00 |
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Ciarán O'Mara
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3e1a802372
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Ensure fields are empty
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2020-04-12 17:35:01 +10:00 |
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Ciarán O'Mara
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89d7e94f77
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Increment version
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2020-04-12 17:23:31 +10:00 |
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Ciarán O'Mara
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6ae1180cfa
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Merge branch 'hotfix/header'
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2020-03-21 17:28:02 +11:00 |
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Ciarán O'Mara
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d0e2560ec4
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Correct header parsing
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2020-03-21 17:18:39 +11:00 |
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Ciarán O'Mara
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e69c6de586
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Equality comparators
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2020-03-21 17:18:34 +11:00 |
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Ciarán O'Mara
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f6846edfb1
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Check header in roundtrip
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2020-03-21 17:16:14 +11:00 |
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Ciarán O'Mara
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031751f6b3
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Increment version
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2020-03-21 00:41:24 +11:00 |
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Ciarán O'Mara
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c139754845
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Merge branch 'release/v0.2.0'
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2020-03-16 22:18:30 +11:00 |
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Ciarán O'Mara
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8702799593
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Increment version
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2020-03-16 21:59:40 +11:00 |
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Ciarán O'Mara
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2aaab4d9ab
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Merge branch 'feature/transcodingstreams' into develop
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2020-03-16 21:56:24 +11:00 |
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Ciarán O'Mara
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de56faf066
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Migrate from BufferedStreams to TranscodingStreams
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2020-03-13 23:01:25 +11:00 |
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Ciarán O'Mara
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12db2c4ea8
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Align emission symbols for TranscodingStreams
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2020-03-13 23:01:25 +11:00 |
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Ciarán O'Mara
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6cd89aba08
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Move isinteractive into machine
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2020-03-13 23:01:25 +11:00 |
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Ciarán O'Mara
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892ad0d7dc
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Pipe into eval
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2020-03-13 23:01:25 +11:00 |
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Ciarán O'Mara
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e63ce2e398
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Group Automa into readrecord.jl
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2020-03-13 23:01:25 +11:00 |
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Ciarán O'Mara
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365f7922fa
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Quick fix for BioGenerics.ReaderHelper functions
This fix is likely to be replaced when migrating to TranscodingStreams.
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2020-03-13 23:01:25 +11:00 |
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Ciarán O'Mara
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c59a157675
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Quick fix for BioCore.Ragel.State
This fix is likely to be replaced when migrating to TranscodingStreams.
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2020-03-13 23:01:25 +11:00 |
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Ciarán O'Mara
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2cad552f63
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Quick fix for BioCore.RecordHelper: unsafe_parse_decimal
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2020-03-13 23:01:25 +11:00 |
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Ciarán O'Mara
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c4f3c4b0df
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Migrate to BioGenerics
Basic find and replace.
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2020-03-13 23:01:25 +11:00 |
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Ciarán O'Mara
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e8ad60b086
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Use accessor functions
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2020-03-13 22:58:34 +11:00 |
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Ciarán O'Mara
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b0069d6f27
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Preallocate
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2020-03-13 22:58:34 +11:00 |
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Ciarán O'Mara
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789cccbaff
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Flatten elseif
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2020-03-13 22:58:34 +11:00 |
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Ciarán O'Mara
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ef99c70317
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Flatten returns
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2020-03-13 22:58:34 +11:00 |
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Ciarán O'Mara
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7a4d6d143d
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Merge branch 'master' into develop
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2020-03-13 22:58:02 +11:00 |
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Ciarán O'Mara
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5aca5f0011
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Merge branch 'hotfix/SAM'
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2020-03-13 22:42:25 +11:00 |
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Ciarán O'Mara
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f272b41031
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Flatten
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2020-03-13 22:09:28 +11:00 |
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herbstk
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6a33ac06a7
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✅ Enhanced unit test for rightposition (#37)
Added additional tests for SAM.Record and BAM.Record for `rightposition` (and implicitly `alignlength`).
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2020-03-13 20:41:06 +11:00 |
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Konrad Herbst
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8d14563f9d
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🐛 Fix SAM.alignlength(record::Record)::Int (#37)
Fixes issue #37 by re-initializing `len` in `SAM.alignlength`.
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2020-03-13 20:41:06 +11:00 |
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Ciarán O'Mara
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6f03bef623
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Increment version
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2020-03-13 20:41:06 +11:00 |
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Ciarán O'Mara
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406d290b13
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Merge branch 'master' into develop
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2020-02-28 16:18:23 +11:00 |
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Ciarán O'Mara
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109f25bd52
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Merge branch 'release/v0.1.0'
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2020-02-28 16:18:23 +11:00 |
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Ciarán O'Mara
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085a724b4f
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Update project status
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2020-02-28 14:30:56 +11:00 |
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Ciarán O'Mara
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1bcd7c344c
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Documentation
- API autodocs.
- Inline links for documenter.
- Logo.
- Badges.
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2020-02-28 14:29:53 +11:00 |
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Ciarán O'Mara
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30a9911e58
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Documentation roundup
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2020-02-28 12:27:34 +11:00 |
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Ciarán O'Mara
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bf835d9ff0
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Add documentation workflow
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2020-02-28 12:27:34 +11:00 |
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Ciarán O'Mara
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4b0a8a6644
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Add TagBot workflow
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2020-02-28 12:27:34 +11:00 |
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Ciarán O'Mara
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514e2c901d
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Add funding
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2020-02-28 12:27:25 +11:00 |
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Ciarán O'Mara
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2df146b8fc
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Use FormatSpecimens
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2020-02-26 10:28:39 +11:00 |
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Ciarán O'Mara
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1a3c986152
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Minimal code adjustments for working separation
- Update to use GenomicFeatures v2.
- BioAlignments v2.
- BioSequences v2.
- Indexes v0.1.
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2020-02-20 21:19:07 +11:00 |
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Ciarán O'Mara
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7a56931b90
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Naive code roundup
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2020-02-20 10:19:28 +11:00 |
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Ciarán O'Mara
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282d80a758
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Continuous Integration
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2020-02-20 10:19:27 +11:00 |
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Ciarán O'Mara
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b2ec340474
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CompatHelper workflow
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2020-02-02 20:05:05 +11:00 |
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Ciarán O'Mara
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78d2329f70
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Add .github templates
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2020-02-02 20:05:05 +11:00 |
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Ciarán O'Mara
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17ea000940
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Add original authors
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2020-02-02 20:05:04 +11:00 |
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Ciarán O'Mara
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07c0f925e6
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Generated files
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2020-01-17 16:34:47 +11:00 |
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Ciarán O'Mara
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c8d7ea0524
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Brief description
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2020-01-17 16:31:25 +11:00 |
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Ciarán O'Mara
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a8133f4316
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Initial commit
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2020-01-17 16:30:35 +11:00 |
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