1826 commits

This branch

This branch

All branches

Author	SHA1	Message	Date
Athanasios Baltzis	002fc84362	Add crg custom config file and update nfcore_custom.config	2022-10-20 18:41:40 +02:00
Athanasios Baltzis	d2e82e4fd2	Add profile to main.yml	2022-10-20 18:15:51 +02:00
Athanasios Baltzis	7547fba92e	Add proteinfold-specific CRG config	2022-10-20 18:00:14 +02:00
Alexander Peltzer	c40faeb95e	Merge pull request #312 from nf-core/kevbrick-patch-1 ... Update nihbiowulf.config - set standard profile to slurm	2022-10-19 10:56:29 +02:00
Alexander Peltzer	add5fc458a	Merge pull request #264 from bwlang/varskip_designs ... adds varskip primer designs	2022-10-19 10:55:54 +02:00
Alexander Peltzer	c2710b1b63	Merge branch 'master' into varskip_designs	2022-10-19 10:42:00 +02:00
Alexander Peltzer	211a1bcb73	Merge branch 'master' into kevbrick-patch-1	2022-10-19 10:41:41 +02:00
Alexander Peltzer	1fe5d5d024	Merge pull request #352 from ajodeh-juma/gis-branch ... add gis.md documentation	2022-10-19 10:41:12 +02:00
Alexander Peltzer	cdc095c4f1	Merge branch 'master' into gis-branch	2022-10-19 10:38:51 +02:00
Alexander Peltzer	7a24bb8d45	Merge pull request #429 from chriswyatt1/ucl_myriad ... Ucl_myriad	2022-10-19 10:35:40 +02:00
chriswyatt1	f4c13e6511	fix_trainling_nl	2022-10-18 14:10:55 +00:00
chriswyatt1	9b971c2b76	Ucl_myriad	2022-10-18 14:03:07 +00:00
Matthias De Smet	9a1e629b7b	Merge pull request #428 from nf-core/vsc_ugent/limit_queuesize ... vsc_ugent: limit queuesize	2022-10-13 08:53:27 +02:00
Matthias De Smet	adbf728ce5	vsc_ugent: limit queuesize	2022-10-13 07:54:30 +02:00
Maxime U. Garcia	62a2860b0d	Merge pull request #427 from nf-core/praveenraj2018-patch-1 ... Disable mounting of KI lab folders	2022-10-10 16:41:55 +02:00
Maxime U. Garcia	6e2a24bdd6	Merge pull request #426 from Aratz/master ... Update UPPMAX documentation	2022-10-10 16:39:58 +02:00
Adrien Coulier	278ae391a0	Apply suggestions from code review ... replace `nf-tools` by `nf-core` Co-authored-by: Matthias Hörtenhuber <mashehu@users.noreply.github.com>	2022-10-10 16:21:47 +02:00
Adrien Coulier	ec8d67285a	Run prettier	2022-10-10 16:03:39 +02:00
Praveen Raj S	f200f6ab44	Disable mounting of KI lab folders ... Do not mount KI lab folders. The drives are not used anymore.	2022-10-10 16:01:22 +02:00
Adrien Coulier	fb17e0c7f4	Explain how to install nf-core through modules ... fixes #345	2022-10-10 15:35:58 +02:00
Edmund Miller	5c65e69941	Merge pull request #424 from nf-core/demux-awstower ... feat(demultiplex): Add optimized transfers for bases2fastq	2022-10-05 23:01:40 +00:00
Edmund Miller	33708acdc5	docs(demultiplex): Add aws_tower docs	2022-10-05 17:21:23 -05:00
Edmund Miller	0cabf67b61	feat(demultiplex): Add optimized transfers for bases2fastq	2022-10-05 17:21:23 -05:00
Phil Ewels	62d4e0d06b	Merge pull request #425 from sheffield-bioinformatics-core/sbc_sharc ... Updates to sbc_sharc configs	2022-10-05 21:21:14 +02:00
Lewis Quayle	755862fc61	Merge branch 'nf-core:master' into sbc_sharc	2022-10-05 19:55:43 +01:00
Alexander Peltzer	540add8238	Merge pull request #422 from giusmar/master ... Add TIGEM config file	2022-10-05 16:40:24 +02:00
Alexander Peltzer	e2146b5905	Update docs/tigem.md	2022-10-05 09:59:07 +02:00
Giuseppe Martone	64fec62a6d	Merge branch 'master' into master	2022-10-04 22:59:17 +02:00
Giuseppe Martone	e37bccc9d8	Update tigem.config	2022-10-04 22:58:50 +02:00
Giuseppe Martone	baf857654c	Update tigem.md	2022-10-04 22:28:38 +02:00
Alexander Peltzer	8e217589b7	Merge branch 'master' into gis-branch	2022-10-04 21:59:27 +02:00
Alexander Peltzer	34441a8f82	Update docs/gis.md	2022-10-04 21:59:19 +02:00
Alexander Peltzer	a9781042c7	Merge pull request #392 from nf-core/custom-mag-eva ... Fix python related seg faults mag@eva	2022-10-04 21:58:49 +02:00
Alexander Peltzer	0d8471a082	Merge pull request #421 from Puumanamana/master ... University of Hawaii at Manoa's HPCC config	2022-10-04 21:56:40 +02:00
Alexander Peltzer	8b68ffce89	Merge branch 'master' into custom-mag-eva	2022-10-04 21:55:37 +02:00
nf-core-bot	cade84aacd	[automated] Fix linting with Prettier	2022-10-04 19:50:51 +00:00
Phil Ewels	7556391c97	Merge pull request #423 from marchoeppner/ccga_beegfs_update ... Updating CCGA med to use the new Beegfs file system	2022-10-04 14:31:19 +02:00
Phil Ewels	e78d941105	Merge branch 'master' into ccga_beegfs_update	2022-10-04 14:18:51 +02:00
Marc Hoeppner	e5b798e21f	Updating CCGA med to use the new Beegfs file system	2022-10-04 14:07:44 +02:00
Giuseppe Martone	5758687a09	Update main.yml	2022-10-04 11:07:36 +02:00
Giuseppe Martone	a4244eb346	Update README.md	2022-10-04 11:06:26 +02:00
Giuseppe Martone	bde7502ed2	Update nfcore_custom.config	2022-10-04 10:54:13 +02:00
Giuseppe Martone	2479c1e7e8	Update tigem.md	2022-10-04 10:53:27 +02:00
Giuseppe Martone	da0482a904	Create tigem.md	2022-10-04 10:52:50 +02:00
Giuseppe Martone	ce39096f32	Create tigem.config	2022-10-04 10:44:19 +02:00
lquayle88	584052cfff	Revised base and all pipeline configs to provide memory on per core basis	2022-10-04 09:12:29 +01:00
lquayle88	3f2ffa314d	Revised base and sarek configs to provide memory on per core basis	2022-10-04 00:25:16 +01:00
Cedric	2825f33ded	conda env setup improvement	2022-10-02 19:15:59 -10:00
Cedric	d429a59a0d	add automounts for singularity	2022-10-02 18:44:22 -10:00
Cedric Arisdakessian	e89cb7bd5e	fix indentation	2022-10-03 03:49:04 +00:00