74 commits

Author	SHA1	Message	Date
Alexander Peltzer	23f9fd2d73	Merge branch 'master' into master	2019-11-26 14:20:36 +01:00
Noirot Céline	42d99e7006	Update genotoul.md	2019-11-26 13:18:34 +01:00
Alexander Peltzer	aeb2fb6dc0	Fix all the markdownlinting errors	2019-11-26 00:48:17 +01:00
Noirot Céline	ed4436c1a6	Merge branch 'master' into master	2019-11-25 16:24:12 +01:00
noirot	db51c49b2f	Add genotoul config	2019-11-25 14:54:25 +01:00
MaxUlysse	08a6b74825	add new profile to be shared: awsbatch	2019-11-19 14:16:06 +01:00
Alexander Peltzer	d2603a134e	Add in denbi cloud configs	2019-11-11 12:26:19 +01:00
Phil Ewels	6790dbd4a3	Merge pull request #82 from arontommi/dev ... documentation on how to fix bianca "Requested node configuration is not available" problem	2019-11-08 15:07:07 +01:00
Phil Ewels	5e7d13df89	Update uppmax.md	2019-11-08 10:59:34 +01:00
arontommi	99f4d9b9bd	documentation on how to fix bianca cluster configuration problem	2019-11-06 13:10:09 +01:00
maxibor	47a7d57db4	update shh doc	2019-10-28 16:09:00 +01:00
phue	5a9dbe5d7c	MENDEL is no more ... the cluster is no longer operational, was replaced by CBE	2019-10-28 14:11:34 +01:00
Alexander Peltzer	5348b8c609	Revert "BINAC SMP / Short / Long Updates"	2019-10-28 13:12:31 +01:00
Alexander Peltzer	b5b2dd817f	Merge all	2019-10-27 13:24:45 +01:00
Anthony Bretaudeau	883a761651	add link	2019-10-16 18:45:26 +02:00
Anthony Bretaudeau	1f2786c78f	add genouest cluster	2019-10-16 18:15:04 +02:00
phue	9b3fda36f6	update singularity version ... singularity/3.1.0 is not available anymore	2019-10-10 21:22:19 +02:00
phue	5e257e7e9a	add cbe profile	2019-09-22 16:45:09 +02:00
MaxUlysse	f69524d59a	feat: update docs	2019-08-07 11:56:10 +02:00
MaxUlysse	332ba0dadb	fix: update and rearrange munin configuration file and docs	2019-08-07 11:10:48 +02:00
Martin Proks	c583aa0233	Added kraken config (#15) ... * Added kraken template * docs: updated some info * fix: updated igenomes_base path	2019-08-05 11:19:05 +02:00
Alexander Peltzer	82ffedf895	Drop aquila	2019-07-30 18:53:36 +02:00
Alexander Peltzer	4e48d4cc62	Fix remaining points by drpatelh	2019-07-30 18:53:00 +02:00
Alexander Peltzer	35c715ca3b	Merge remote-tracking branch 'upstream/master'	2019-07-30 16:53:19 +02:00
Remi Planel	1c0d596582	Merge remote-tracking branch 'upstream/master'	2019-07-30 16:15:20 +02:00
Remi Planel	be28a34839	Updat Pasteur doc	2019-07-30 16:12:30 +02:00
Remi Planel	64e78a3dc1	Update the doc	2019-07-30 15:17:25 +02:00
Remi Planel	6f264ac2ca	Add pasteur profile doc	2019-07-30 15:15:30 +02:00
marchoeppner	b74f020f14	Update docs/ccga_dx.md ... Co-Authored-By: Harshil Patel <drpatelh@users.noreply.github.com>	2019-07-29 12:45:30 +02:00
marchoeppner	71bc98afae	Adding config file for CCGA dx cluster	2019-07-29 12:06:29 +02:00
Olga Botvinnik	474e98daaf	Merge branch 'master' into olgabot/czb-update	2019-07-09 16:02:25 -07:00
marchoeppner	fe0153befd	Updating CCGA documentation	2019-07-05 08:30:02 +02:00
marchoeppner	d66bf4e478	Updating CCGA documentation	2019-07-05 08:28:18 +02:00
Olga Botvinnik	b82d68c009	Add docs	2019-06-24 17:55:01 -07:00
Alexander Peltzer	ebe838ac7e	Merge pull request #45 from czbiohub/olgabot/czbiohub ... [WIP] Add CZ Biohub	2019-06-06 13:35:34 +02:00
Olga Botvinnik	ad7e26ea69	Write out docs for czbiohub" ... git push	2019-06-05 14:42:24 -07:00
Alexander Peltzer	515e9484de	Merge pull request #44 from drpatelh/dev ... Add proper nf-core logo	2019-06-01 12:36:57 +02:00
drpatelh	ac804859f4	Add nf-core logo	2019-05-31 00:47:06 +01:00
Alexander Peltzer	0acdcc3813	Add Aquila Config Singapore	2019-05-04 23:20:15 +02:00
Tobias Schraink	d91b06d884	added missing line in prince and bigpurple docs	2019-04-18 14:25:27 -04:00
Tobias Schraink	4ba831705d	added nyu prince and bigpurple md files, added singularity cacheDir to prince and bigpurple configs	2019-04-18 14:13:02 -04:00
KochTobi	aaa7be049a	Update cfc config ... * Change singularity version documentation	2019-03-16 14:11:59 +01:00
James A. Fellows Yates	e503a3a064	Added new cluster and singularity cache	2019-03-14 21:21:31 +01:00
phue	13df59bfaf	remove singularity support ... reasons: * the kernel running on the compute nodes does not support overlayfs und thus containers downloaded from public registries won't run because they lack the /lustre mountpoint * building containers manually using the Singularity file would work, however nf-core pipelines will stop providing these files in future releases	2019-03-12 17:57:31 +00:00
phue	6fc65b54a2	add mendel.md	2019-02-27 22:26:31 +00:00
drpatelh	24fb466bc0	Changed description for Singularity image download	2019-01-11 14:52:15 +00:00
Harshil Patel	789d211b18	Update munin.md	2019-01-11 14:32:35 +00:00
Martin Proks	7acd9cf7df	Updating suggested changes	2019-01-11 15:28:10 +01:00
Martin Proks	89dbb6c061	Setting Singularity as default method	2019-01-11 14:37:12 +01:00
Martin Proks	548c8bca3f	Updated munin doc and configuration	2019-01-10 15:46:16 +01:00