millironx/nf-configs
1
0
Fork 0
mirror of https://github.com/MillironX/nf-configs.git synced 2024-11-27 01:59:56 +00:00
Code Issues Releases Packages Activity
1654 commits 4 branches 0 tags 1.9 MiB
Commit graph

1654 commits

This branch
This branch
All branches
Author SHA1 Message Date
Emelie Nilsso
2ea06ffab8 Modified uppmax and ampliseq specific config to fit with the divided preparation of the database 2020-11-23 21:20:36 +01:00
James A. Fellows Yates
f3c7b36e3d
Merge pull request #189 from nf-core/TCLamnidis-patch-1 
Move sdag queue specification block in sdag profile
 2020-11-18 13:16:54 +01:00
Thiseas C. Lamnidis
71d1ff2226
Add params block to sdag queue 
Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
 2020-11-18 13:04:46 +01:00
Thiseas C. Lamnidis
da781907f2
Move sdag queue specification block in sdag profile 2020-11-17 19:45:06 +01:00
Harshil Patel
be9cb33ac1
Merge pull request #188 from andrewfrank/patch-1 
Fix parameters in google.md
 2020-11-12 17:12:41 +00:00
Andrew Frank
d70fc2605a
Fix parameters in google.md 
Change parameters from hyphens to underscores to accurately reflect google.config
 2020-11-12 11:52:58 -05:00
James A. Fellows Yates
4dfacc1894
Merge pull request #13 from nf-core/master 
Sync latest changes
 2020-11-10 16:34:16 +01:00
Maxime Borry
c95fd9d52f
Merge pull request #186 from jfy133/shh-singularity-runoptions 
Remove custom singularity runOptions from SHH config
 2020-11-10 15:39:40 +01:00
James A. Fellows Yates
9d4d682867
Update shh.config 2020-11-10 15:14:03 +01:00
Gisela Gabernet Garriga
885f0ce5f6 awsbatch config update 2020-11-09 22:41:38 +01:00
Maxime Garcia
3cc3445549
Merge pull request #183 from abims-sbr/abims 
Add ABiMS
 2020-10-23 09:57:20 +02:00
lecorguille
e3d733d87e Add ABiMS - fix lint 2020-10-23 09:29:54 +02:00
lecorguille
4d03f72c78 Add ABiMS - last bits of doc 2020-10-23 09:27:12 +02:00
lecorguille
6ee6b7bf56 Add ABiMS - remove a useless link 2020-10-23 00:12:02 +02:00
lecorguille
c974972585 Add ABiMS - side files 2020-10-23 00:12:02 +02:00
lecorguille
23ba1c58b1 Add ABiMS - NXF_SINGULARITY_CACHEDIR 2020-10-23 00:11:58 +02:00
lecorguille
90d1f9072b Add ABiMS - autoMounts = false 2020-10-22 18:18:55 +02:00
lecorguille
f21d16b24f Add ABiMS - fix lint 2020-10-22 17:47:25 +02:00
lecorguille
a63ca751ee Add ABiMS 2020-10-22 16:57:41 +02:00
James A. Fellows Yates
804f53c58c
Merge pull request #178 from jfy133/master 
Add Max Planck Computing and Data Facility Cobra/Raven Clusters
 2020-10-22 13:34:11 +02:00
James A. Fellows Yates
7088ed196f
Update mpcdf.md 2020-10-22 11:08:29 +02:00
James A. Fellows Yates
3995057d7f
Update mpcdf.config 2020-10-22 10:42:46 +02:00
James A. Fellows Yates
0d6e269322
Update mpcdf.md 2020-10-15 14:24:08 +02:00
James A. Fellows Yates
05deeca2d6
Update mpcdf.config 2020-10-15 14:22:35 +02:00
James A. Fellows Yates
2c2d23ac26
Merge pull request #181 from nf-core/shh-patch 
Update SHH profile to reduce number of parallel jobs
 2020-09-29 14:24:12 +02:00
James A. Fellows Yates
e26c22b2f1
Update shh.config 2020-09-29 14:03:35 +02:00
Johannes Alneberg
59cd8d69ed
Merge pull request #180 from MaxUlysse/rackham 
Rackham
 2020-09-29 10:31:04 +02:00
MaxUlysse
2ccbdd3367 update params to latest version 2020-09-28 13:59:42 +02:00
MaxUlysse
8c0cc4b9ec code polishing 2020-09-25 09:57:50 +02:00
MaxUlysse
81f910cc95 add specific BamQC config 2020-09-25 09:49:43 +02:00
MaxUlysse
fbe7bd133a update uppmax specific sarek config 2020-09-25 08:33:53 +02:00
James A. Fellows Yates
11f1fb71db
Update mpcdf.config 2020-09-16 10:21:58 +02:00
James A. Fellows Yates
bbbdd3cb0f
Update mpcdf.config 2020-09-16 10:21:42 +02:00
James A. Fellows Yates
5b3492d240
Update mpcdf.config 2020-09-16 10:21:26 +02:00
James A. Fellows Yates
3115963b3e
Update mpcdf.config 2020-09-15 19:53:27 +02:00
James A. Fellows Yates
c6f7573d01
Update mpcdf.config 2020-09-15 17:48:54 +02:00
James A. Fellows Yates
bf87ec24e7
Update mpcdf.config 2020-09-15 17:45:38 +02:00
Edmund Miller
87c757dc47
Merge pull request #179 from Emiller88/utd 
feat: add Kim queue
 2020-09-14 10:28:43 -05:00
Edmund Miller
2c06019d89
fix(utd): Add check for less than 12 cpu 2020-09-13 20:46:14 -05:00
Edmund Miller
dc2735207e
feat(utd): add Kim queue 2020-09-13 20:46:10 -05:00
James A. Fellows Yates
3b7902d11b
Mad multi-core increase CPUs on retry 2020-09-06 08:23:35 +02:00
James A. Fellows Yates
4335e5deb7
Update mpcdf.config 2020-09-04 20:17:09 +02:00
James A. Fellows Yates
af8d25ed09
Update main.yml 2020-09-04 20:14:35 +02:00
James A. Fellows Yates
4f991d2c0c
Update eager.config 2020-09-04 19:59:27 +02:00
James A. Fellows Yates
b4e275c3b9
Add MPCDF for EAGER 2020-09-04 19:57:25 +02:00
James A. Fellows Yates
5c7ab234b6
Create mpcdf.config 2020-09-04 19:55:40 +02:00
James A. Fellows Yates
65fce5c2a5
Update nfcore_custom.config 2020-09-04 19:52:46 +02:00
James A. Fellows Yates
9df85be081
Update mpcdf.md 2020-09-03 20:27:15 +02:00
James A. Fellows Yates
09cd5cad65
Update mpcdf.md 2020-09-03 20:25:37 +02:00
James A. Fellows Yates
0a685c1cc2
Update mpcdf.config 2020-09-03 20:24:11 +02:00