Alexander Peltzer
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4cad12c918
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Merge pull request #42 from maxibor/master
Add automounts for singularity
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2019-04-25 17:14:28 +02:00 |
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maxibor
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de1b2aa7d2
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remove autoformat added space
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2019-04-25 15:50:48 +02:00 |
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maxibor
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efd831a8a3
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add automounts for singularity
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2019-04-25 15:48:20 +02:00 |
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Alexander Peltzer
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7d7c18273b
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Merge pull request #41 from tobsecret/master
Added configs for NYU clusters BigPurple (NYU Med) and Prince (NYU main campus)
Last PR merge before Easter holiday ;-)
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2019-04-19 00:13:49 +02:00 |
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Tobias Schraink
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d91b06d884
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added missing line in prince and bigpurple docs
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2019-04-18 14:25:27 -04:00 |
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Tobias Schraink
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b6c1d3ba51
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added bigpurple and prince doc links in README
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2019-04-18 14:23:17 -04:00 |
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Tobias Schraink
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4ba831705d
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added nyu prince and bigpurple md files, added singularity cacheDir to prince and bigpurple configs
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2019-04-18 14:13:02 -04:00 |
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Alexander Peltzer
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f699c3ad18
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Merge pull request #40 from maxibor/master
Add iGenomes basePath for SHH
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2019-04-18 12:21:22 +02:00 |
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maxibor
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9d9ac4c3bb
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remove whitespace
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2019-04-18 11:22:54 +02:00 |
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maxibor
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c41dd2c65f
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Merge branch 'master' of https://github.com/nf-core/configs
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2019-04-18 11:21:27 +02:00 |
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maxibor
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1772f4119c
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adding igenomes to shh config
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2019-04-18 11:19:53 +02:00 |
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Tobias Schraink
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4a915e330a
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added warnings to run on SCRATCH
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2019-04-17 17:15:16 -04:00 |
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Tobias Schraink
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51c2a54399
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added nyu prince and bigpurple configs
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2019-04-17 16:59:38 -04:00 |
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James A. Fellows Yates
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37ae0fa3a6
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Merge pull request #38 from maxibor/master
add queueSize limited to 5 for SHH short queue
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2019-03-20 13:52:59 +01:00 |
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maxibor
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76a5fcf077
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switch to queueSize 16 for shh config
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2019-03-20 13:44:13 +01:00 |
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maxibor
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0929349303
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add queueSize limited to 5
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2019-03-18 11:13:11 +01:00 |
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Alexander Peltzer
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d95b464e13
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Merge pull request #35 from jfy133/master
Updates to SHH config
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2019-03-15 09:56:44 +01:00 |
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James A. Fellows Yates
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ecb36dd8c2
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Reduced memory and CPUs for cdag compatibility
Also matches 'fair use' policy
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2019-03-14 21:26:43 +01:00 |
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James A. Fellows Yates
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e503a3a064
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Added new cluster and singularity cache
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2019-03-14 21:21:31 +01:00 |
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James A. Fellows Yates
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3da1373c14
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Updated path to centralised singularity cache
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2019-03-14 21:16:02 +01:00 |
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James A. Fellows Yates
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b4e8e271be
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Merge pull request #3 from nf-core/master
Syncing
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2019-03-14 21:13:48 +01:00 |
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Phil Ewels
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79eb58bbb8
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Merge pull request #34 from drpatelh/master
Add hostname for Crick
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2019-03-13 18:04:26 +01:00 |
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Harshil Patel
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26c101a5ab
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Alphabetical order
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2019-03-13 16:53:30 +00:00 |
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Harshil Patel
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1843b2218c
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Update nfcore_custom.config
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2019-03-13 16:52:57 +00:00 |
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Harshil Patel
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857b0565c2
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Update nfcore_custom.config
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2019-03-13 16:51:45 +00:00 |
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Harshil Patel
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8bc975c8c3
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Merge pull request #33 from ewels/master
Removed params.config_profile_name, added params.hostnames
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2019-03-13 16:49:43 +00:00 |
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Phil Ewels
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d0ca05a221
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;
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2019-03-13 17:33:23 +01:00 |
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Phil Ewels
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1191863e1c
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Removed params.config_profile_name, added params.hostnames
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2019-03-13 17:19:34 +01:00 |
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Phil Ewels
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4ac14cd6aa
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Merge pull request #30 from apeltzer/master
Last bump for binac/cfc
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2019-03-13 09:15:04 +01:00 |
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Alexander Peltzer
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b19887af10
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Merge remote-tracking branch 'upstream/master'
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2019-03-12 18:49:01 +01:00 |
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Alexander Peltzer
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fbf9397182
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Bump
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2019-03-12 18:48:29 +01:00 |
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Alexander Peltzer
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ee249ca7af
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Merge pull request #31 from ewels/master
Remove Travis requirement for PRs to be against dev branch
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2019-03-12 18:42:55 +01:00 |
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Phil Ewels
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eaa1c8360f
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Travis multiline yaml
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2019-03-12 17:25:16 +01:00 |
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Phil Ewels
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a79564f0af
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Remove requirement for dev branch PRs
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2019-03-12 17:02:24 +01:00 |
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Alexander Peltzer
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3ee7195fa8
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Central resource for both binac and cfc now
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2019-03-12 14:58:41 +01:00 |
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Phil Ewels
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1e2c0c3e04
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Merge pull request #29 from apeltzer/master
iGenomes Rollout on "Binac" too
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2019-03-11 18:26:19 +01:00 |
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Alexander Peltzer
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68b759d6ef
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Mini Update
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2019-03-11 18:12:35 +01:00 |
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Alexander Peltzer
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f4f3c4e53b
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Roll out binac too
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2019-03-11 14:29:42 +01:00 |
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Alexander Peltzer
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880adfbb98
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Merge pull request #28 from nf-core/ewels-patch-1
Remove incorrect comment in code example
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2019-03-08 17:05:56 +01:00 |
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Phil Ewels
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ef1aeafef6
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Remove incorrect comment in code example
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2019-03-08 16:41:47 +01:00 |
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Phil Ewels
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ceecc15ac8
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Merge pull request #27 from apeltzer/master
Add the TravisCI badge as we have tests now
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2019-03-08 16:38:15 +01:00 |
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Alexander Peltzer
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c8c150d67c
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Add the TravisCI badge as we have tests now
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2019-03-08 13:39:25 +01:00 |
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Phil Ewels
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a2fa9d3f01
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Merge pull request #24 from nf-core/dev
Include config integration test
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2019-03-08 12:36:27 +01:00 |
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Sven Fillinger
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ba3d221af6
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Corrects regex
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2019-03-08 12:23:27 +01:00 |
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Sven Fillinger
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bbe0d30462
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Fixes syntax error in travis script
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2019-03-08 12:00:43 +01:00 |
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Sven Fillinger
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d4cd9b1f0a
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Corrects profile grep
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2019-03-08 11:58:37 +01:00 |
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Sven Fillinger
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e401769698
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Corrects NXF command line call
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2019-03-08 10:54:41 +01:00 |
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Sven Fillinger
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7962f7d756
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Iterates over profiles and calls Nextflow
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2019-03-08 10:52:09 +01:00 |
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Sven Fillinger
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1dc523d726
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Removes test config
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2019-03-08 10:37:27 +01:00 |
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Sven Fillinger
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4d43077ddf
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Adds simple NXF config script
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2019-03-08 10:36:03 +01:00 |
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