1731 commits

This branch

This branch

All branches

Author	SHA1	Message	Date
Adrija Kalvisa	55d7b3fc00	add KU SUND DANGPU ... add the profile for Dangpu server hosted by Novo Nordisk Foundation Center for Stem Cell Medicine (reNEW)/ Novo Nordisk Foundation Center for Protein Research (CPR)	2022-09-22 13:35:08 +02:00
Adrija Kalvisa	5315ddd92f	add KU_SUND_DANGPU	2022-09-22 13:22:26 +02:00
Adrija Kalvisa	ce916bf4b5	fix typo	2022-09-22 13:21:10 +02:00
Adrija Kalvisa	2e9578498a	add ku_sund_dangpu.config	2022-09-22 13:20:42 +02:00
Adrija Kalvisa	7959b14385	Merge branch 'nf-core:master' into master	2022-09-22 13:15:32 +02:00
Austyn Trull	5400df135d	Merge pull request #412 from nf-core/cheaha_env_variable_updates ... Fix cheaha config due to use of incorrect variable	2022-09-21 13:38:24 -05:00
Gisela Gabernet	89dc3c429f	Merge pull request #418 from ggabernet/master ... update cfc config maintenance	2022-09-18 12:07:43 +02:00
ggabernet	c709be3b59	update cfc config maintenance	2022-09-18 12:06:37 +02:00
James A. Fellows Yates	c9c4d02f0d	Merge pull request #416 from jfy133/master ... Add HKI cluster	2022-09-15 09:18:00 +02:00
James A. Fellows Yates	ec638e62de	Apply suggestions from code review ... Co-authored-by: Jasmin F <73216762+jasmezz@users.noreply.github.com>	2022-09-15 09:10:29 +02:00
James A. Fellows Yates	b8751af6c6	Update conf/pipeline/mag/eva.config	2022-09-14 16:17:17 +02:00
James Fellows Yates	c0effc0366	Add HKI profile files	2022-09-14 15:34:27 +02:00
James A. Fellows Yates	8ea01e2041	Merge branch 'nf-core:master' into master	2022-09-14 15:01:34 +02:00
James A. Fellows Yates	3fcf708134	Merge pull request #414 from sheffield-bioinformatics-core/sbc_sharc ... Added global institutional and pipeline configs for sbc_sharc	2022-09-14 11:46:41 +02:00
Maxime U. Garcia	326ab0036e	Merge pull request #415 from Sage-Bionetworks-Workflows/bgrande/sage-tweaks ... Adjust AWS-related configuration to improve reliability	2022-09-14 11:31:10 +02:00
lquayle88	be356eb400	Ran prettier on docs/sbc_sharc.md	2022-09-14 10:24:56 +01:00
lquayle88	32403b6222	Updated pipeline config docs for atacseq, chipseq and rnaseq	2022-09-14 08:46:11 +01:00
lquayle88	91bfa7341f	Made changes requested for PR	2022-09-14 08:42:40 +01:00
Bruno Grande	3d3ee391be	Limit the number of parallel transfers	2022-09-13 13:15:30 -07:00
Lewis Quayle	61ae463606	Updated sbc_sharc.md	2022-09-13 17:13:57 +01:00
lquayle88	9fef35d7d3	Updated pipeline configs for atacseq and chipseq	2022-09-13 17:08:56 +01:00
lquayle88	a9b62c53e0	Added global institutional and pipeline configs for sbc_sharc	2022-09-13 17:02:44 +01:00
Bruno Grande	abae5c4bd8	Decrease AWS Batch queue size	2022-09-12 11:40:43 -07:00
Bruno Grande	47fa890ad7	Merge pull request #407 from Sage-Bionetworks-Workflows/bgrande/sage-aws ... Improve AWS-related config for Sage profile	2022-09-01 13:29:49 -07:00
Bruno Grande	80831358f9	Merge branch 'master' into bgrande/sage-aws	2022-09-01 13:21:36 -07:00
Lara Ianov	8448bb9a1e	re-define TMPDIR	2022-09-01 10:12:07 -05:00
Simon Pearce	6b83603325	Merge pull request #400 from SPPearce/crukmi ... Cancer Research UK Manchester Institute config	2022-09-01 14:01:00 +01:00
SPearce	a142ad7eae	Added link to Sarek specific documentation	2022-09-01 13:55:08 +01:00
SPearce	5981b643c5	Updated the sarek pipeline config	2022-09-01 11:47:12 +01:00
Simon Pearce	2c738cae33	Update crukmi.config	2022-09-01 11:24:11 +01:00
Simon Pearce	a8faeda141	Update crukmi.config	2022-09-01 11:23:07 +01:00
SPearce	800931bff2	Add Sarek specific config	2022-09-01 11:13:23 +01:00
Simon Pearce	ba1d3f24cc	Update crukmi.config	2022-09-01 11:07:14 +01:00
Simon Pearce	897d0a188b	Update nfcore_custom.config ... Co-authored-by: Maxime U. Garcia <maxime.garcia@scilifelab.se>	2022-09-01 10:32:43 +01:00
Simon Pearce	df685f4f0f	Merge branch 'master' into crukmi	2022-09-01 10:29:08 +01:00
James A. Fellows Yates	3664b4812d	Merge pull request #411 from nf-core/docs-improvement ... Add documentation for when you need to use an environmental variable	2022-09-01 11:24:31 +02:00
Simon Pearce	81768e16a9	Merge branch 'nf-core:master' into crukmi	2022-09-01 10:20:25 +01:00
James A. Fellows Yates	5769927bbc	Merge branch 'master' into docs-improvement	2022-09-01 11:15:10 +02:00
Maxime U. Garcia	ebcc3d278f	Merge pull request #410 from nf-core/chear-var-fix ... Fix cheaha config due to use of environmental variable	2022-09-01 11:13:37 +02:00
James Fellows Yates	51f0359b3d	Add documentation for when you need to use an environmental variable	2022-09-01 11:12:15 +02:00
Simon Pearce	14a97ad0e8	Merge branch 'master' into crukmi	2022-09-01 10:07:24 +01:00
James Fellows Yates	b22e8b79c7	Fix cheaha config due to use of environmental variable	2022-09-01 11:01:23 +02:00
ameynert	69468e7ca7	Merge pull request #409 from kalayaneech/master ... A new profile for adcra [KMUTT]	2022-09-01 09:55:12 +01:00
ameynert	28e59e38b4	Run prettier	2022-09-01 09:28:05 +01:00
Kalayanee Chairat	8e275182ea	Update main.yml	2022-09-01 15:16:56 +07:00
Kalayanee Chairat	bf2ab39ea0	Update README.md	2022-09-01 15:15:51 +07:00
Kalayanee Chairat	9681716205	Update adcra.config ... Fixing typo	2022-09-01 15:11:18 +07:00
Kalayanee Chairat	700f14d828	Merge pull request #1 from nf-core/master ... Merging from master	2022-09-01 15:07:43 +07:00
Simon Pearce	864da0b5be	Merge branch 'master' into crukmi	2022-08-31 18:19:47 +01:00
Bruno Grande	9a37404a04	Merge branch 'master' into bgrande/sage-aws	2022-08-31 09:22:07 -07:00