12 commits

Author	SHA1	Message	Date
lquayle88	584052cfff	Revised base and all pipeline configs to provide memory on per core basis	2022-10-04 09:12:29 +01:00
lquayle88	3f2ffa314d	Revised base and sarek configs to provide memory on per core basis	2022-10-04 00:25:16 +01:00
lquayle88	e7ac3ecd19	Modified resource requests in sbc_sharc.config for sarek	2022-10-02 00:24:39 +01:00
lquayle88	9b451b53b7	Increased cpus and memory for GATK4_MARKDUPLICATES in sbc_sharc.config for sarek	2022-10-01 23:31:51 +01:00
lquayle88	10c1490265	Increased memory and time for GATK4_MARKDUPLICATES in sbc_sharc.config for sarek	2022-10-01 23:15:13 +01:00
lquayle88	dbb3b3b44b	Reinstated maxRetries and increased memory for GATK4_MARKDUPLICATES in sbc_sharc.config for sarek	2022-10-01 07:45:28 +01:00
lquayle88	8103718389	Reduced maxRetries upon error in sbc_sharc.config for sarek	2022-09-30 16:54:48 +01:00
lquayle88	c42a5a9a94	Updated resources requested by pipelines	2022-09-23 17:01:58 +01:00
lquayle88	ab1ad832df	Updated resource requests for compatibility with high memory nodes	2022-09-23 13:18:50 +01:00
lquayle88	7e34beb3c9	Updated resource requests for compatibility with general worker nodes	2022-09-23 11:08:39 +01:00
lquayle88	55971bb94d	Modularised error handling strategy to per pipeline basis	2022-09-16 17:29:08 +01:00
lquayle88	a9b62c53e0	Added global institutional and pipeline configs for sbc_sharc	2022-09-13 17:02:44 +01:00